2fax: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:2fax.png|left|200px]]
-<!--
+==CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: N137A OXIDIZED (150K)==
-The line below this paragraph, containing "STRUCTURE_2fax", creates the "Structure Box" on the page.
+<StructureSection load='2fax' size='340' side='right'caption='[[2fax]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2fax]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_beijerinckii Clostridium beijerinckii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FAX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FAX FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-{{STRUCTURE_2fax|  PDB=2fax  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fax OCA], [https://pdbe.org/2fax PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fax RCSB], [https://www.ebi.ac.uk/pdbsum/2fax PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fax ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/FLAV_CLOBE FLAV_CLOBE] Low-potential electron donor to a number of redox enzymes.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fa/2fax_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fax ConSurf].
+<div style="clear:both"></div>
-===CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: N137A OXIDIZED (150K)===
+==See Also==
+*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_9063874}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 9063874 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_9063874}}
-==About this Structure==
-FAX is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_beijerinckii Clostridium beijerinckii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FAX OCA].
-==Reference==
-<ref group="xtra">PMID:9063874</ref><references group="xtra"/>
 [[Category: Clostridium beijerinckii]]
-[[Category: Dixon, M M.]]
+[[Category: Large Structures]]
-[[Category: Eren, M.]]
+[[Category: Dixon MM]]
-[[Category: Feng, Y.]]
+[[Category: Eren M]]
-[[Category: Ludwig, M L.]]
+[[Category: Feng Y]]
-[[Category: Metzger, A L.]]
+[[Category: Ludwig ML]]
-[[Category: Pattridge, K A.]]
+[[Category: Metzger AL]]
-[[Category: Swenson, R.]]
+[[Category: Pattridge KA]]
-[[Category: Electron transport]]
+[[Category: Swenson R]]
-[[Category: Flavoprotein]]
-[[Category: Fmn]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 19:20:46 2009''