2f0d: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2f0d.jpg|left|200px]]


{{Structure
==Crystal structure of Staphylococcal nuclease mutant I92V==
|PDB= 2f0d |SIZE=350|CAPTION= <scene name='initialview01'>2f0d</scene>, resolution 2.50&Aring;
<StructureSection load='2f0d' size='340' side='right'caption='[[2f0d]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2f0d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F0D FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
|GENE= nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f0d OCA], [https://pdbe.org/2f0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f0d RCSB], [https://www.ebi.ac.uk/pdbsum/2f0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f0d ProSAT]</span></td></tr>
|DOMAIN=
</table>
|RELATEDENTRY=[[1ey0|1EY0]], [[2exz|2EXZ]], [[2ey1|2EY1]], [[2ey2|2EY2]], [[2ey5|2EY5]], [[2ey6|2EY6]], [[2eyf|2EYF]], [[2eyh|2EYH]], [[2eyj|2EYJ]], [[2eyl|2EYL]], [[2eym|2EYM]], [[2eyo|2EYO]], [[2eyp|2EYP]], [[2f0e|2F0E]], [[2f0f|2F0F]], [[2f0g|2F0G]], [[2f0h|2F0H]], [[2f0i|2F0I]], [[2f0j|2F0J]], [[2f0k|2F0K]], [[2f0l|2F0L]], [[2f0m|2F0M]], [[2f0n|2F0N]], [[2f0o|2F0O]], [[2f0p|2F0P]], [[2f0q|2F0Q]], [[2f0s|2F0S]], [[2f0t|2F0T]], [[2f0u|2F0U]], [[2f0v|2F0V]], [[2f0w|2F0W]]
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2f0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f0d OCA], [http://www.ebi.ac.uk/pdbsum/2f0d PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2f0d RCSB]</span>
[https://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
}}
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f0/2f0d_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f0d ConSurf].
<div style="clear:both"></div>


'''Crystal structure of Staphylococcal nuclease mutant I92V'''
==See Also==
 
*[[Staphylococcal nuclease 3D structures|Staphylococcal nuclease 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2F0D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F0D OCA].
[[Category: Large Structures]]
[[Category: Micrococcal nuclease]]
[[Category: Single protein]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
[[Category: Lu, J Z.]]
[[Category: Lu JZ]]
[[Category: Sakon, J.]]
[[Category: Sakon J]]
[[Category: Stites, W E.]]
[[Category: Stites WE]]
[[Category: calcium]]
[[Category: dna hydrolase]]
[[Category: endonuclease]]
[[Category: rna hydrolase]]
[[Category: signal]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:56:12 2008''

Latest revision as of 12:20, 14 February 2024

Crystal structure of Staphylococcal nuclease mutant I92VCrystal structure of Staphylococcal nuclease mutant I92V

Structural highlights

2f0d is a 1 chain structure with sequence from Staphylococcus aureus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NUC_STAAU Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2f0d, resolution 2.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2f0d&oldid=4058234"