2ez2: Difference between revisions

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{{Seed}}
[[Image:2ez2.png|left|200px]]


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==Apo tyrosine phenol-lyase from Citrobacter freundii at pH 8.0==
The line below this paragraph, containing "STRUCTURE_2ez2", creates the "Structure Box" on the page.
<StructureSection load='2ez2' size='340' side='right'caption='[[2ez2]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ez2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Citrobacter_freundii Citrobacter freundii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EZ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EZ2 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_2ez2|  PDB=2ez2 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ez2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ez2 OCA], [https://pdbe.org/2ez2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ez2 RCSB], [https://www.ebi.ac.uk/pdbsum/2ez2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ez2 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TPL_CITFR TPL_CITFR]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ez/2ez2_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ez2 ConSurf].
<div style="clear:both"></div>


===Apo tyrosine phenol-lyase from Citrobacter freundii at pH 8.0===
==See Also==
 
*[[Tyrosinase 3D structures|Tyrosinase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_16768450}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 16768450 is the PubMed ID number.
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{{ABSTRACT_PUBMED_16768450}}
 
==About this Structure==
2EZ2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Citrobacter_freundii Citrobacter freundii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EZ2 OCA].
 
==Reference==
Structures of apo- and holo-tyrosine phenol-lyase reveal a catalytically critical closed conformation and suggest a mechanism for activation by K+ ions., Milic D, Matkovic-Calogovic D, Demidkina TV, Kulikova VV, Sinitzina NI, Antson AA, Biochemistry. 2006 Jun 20;45(24):7544-52. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16768450 16768450]
[[Category: Citrobacter freundii]]
[[Category: Citrobacter freundii]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Tyrosine phenol-lyase]]
[[Category: Antson AA]]
[[Category: Antson, A A.]]
[[Category: Demidkina TV]]
[[Category: Demidkina, T V.]]
[[Category: Matkovic-Calogovic D]]
[[Category: Matkovic-Calogovic, D.]]
[[Category: Milic D]]
[[Category: Milic, D.]]
[[Category: Domain closure]]
[[Category: Lyase]]
[[Category: Plp-dependent enzyme]]
[[Category: Pyridoxal-5'-phosphate]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 15:31:56 2008''

Latest revision as of 12:20, 14 February 2024

Apo tyrosine phenol-lyase from Citrobacter freundii at pH 8.0Apo tyrosine phenol-lyase from Citrobacter freundii at pH 8.0

Structural highlights

2ez2 is a 2 chain structure with sequence from Citrobacter freundii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.85Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

TPL_CITFR

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ez2, resolution 1.85Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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