2ewf: Difference between revisions

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[[Image:2ewf.gif|left|200px]]<br /><applet load="2ewf" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2ewf, resolution 1.84&Aring;" />
'''Crystal structure of the site-specific DNA nickase N.BspD6I'''<br />


==About this Structure==
==Crystal structure of the site-specific DNA nickase N.BspD6I==
2EWF is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_sp. Bacillus sp.] with <scene name='pdbligand=BR:'>BR</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EWF OCA].
<StructureSection load='2ewf' size='340' side='right'caption='[[2ewf]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
[[Category: Bacillus sp.]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2ewf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._D6 Bacillus sp. D6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EWF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EWF FirstGlance]. <br>
[[Category: Artyukh, R I.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
[[Category: Bartunik, H D.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene></td></tr>
[[Category: Kachalova, G S.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ewf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ewf OCA], [https://pdbe.org/2ewf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ewf RCSB], [https://www.ebi.ac.uk/pdbsum/2ewf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ewf ProSAT]</span></td></tr>
[[Category: Matvienko, N I.]]
</table>
[[Category: Perevyazova, T A.]]
== Function ==
[[Category: Rogulin, E A.]]
[https://www.uniprot.org/uniprot/A3FEV7_9BACI A3FEV7_9BACI]  
[[Category: Zheleznaya, L A.]]
== Evolutionary Conservation ==
[[Category: BR]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: beta-alpha-barrel]]
Check<jmol>
[[Category: helix-turn-helix]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/2ewf_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ewf ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:15:15 2008''
==See Also==
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
__TOC__
</StructureSection>
[[Category: Bacillus sp. D6]]
[[Category: Large Structures]]
[[Category: Artyukh RI]]
[[Category: Bartunik HD]]
[[Category: Kachalova GS]]
[[Category: Matvienko NI]]
[[Category: Perevyazova TA]]
[[Category: Rogulin EA]]
[[Category: Zheleznaya LA]]

Latest revision as of 12:19, 14 February 2024

Crystal structure of the site-specific DNA nickase N.BspD6ICrystal structure of the site-specific DNA nickase N.BspD6I

Structural highlights

2ewf is a 1 chain structure with sequence from Bacillus sp. D6. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.84Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A3FEV7_9BACI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ewf, resolution 1.84Å

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