2csg: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:2csg.gif|left|200px]]<br /><applet load="2csg" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2csg, resolution 2.90&Aring;" />
-'''Crystal Structure of the Putative Oxidoreductase from Salmonella typhimurium LT2'''<br />
-==About this Structure==
+==Crystal Structure of the Putative Oxidoreductase from Salmonella typhimurium LT2==
-CSG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium_lt2 Salmonella typhimurium lt2] with <scene name='pdbligand=FE:'>FE</scene>, <scene name='pdbligand=ICT:'>ICT</scene>, <scene name='pdbligand=SIN:'>SIN</scene> and <scene name='pdbligand=CIT:'>CIT</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CSG OCA].
+<StructureSection load='2csg' size='340' side='right'caption='[[2csg]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-[[Category: Salmonella typhimurium lt2]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[2csg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CSG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CSG FirstGlance]. <br>
-[[Category: Collart, F.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-[[Category: Joachimiak, A.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=ICT:ISOCITRIC+ACID'>ICT</scene>, <scene name='pdbligand=SIN:SUCCINIC+ACID'>SIN</scene></td></tr>
-[[Category: Kim, Y.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2csg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2csg OCA], [https://pdbe.org/2csg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2csg RCSB], [https://www.ebi.ac.uk/pdbsum/2csg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2csg ProSAT], [https://www.topsan.org/Proteins/MCSG/2csg TOPSAN]</span></td></tr>
-[[Category: Li, H.]]
+</table>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+== Function ==
-[[Category: CIT]]
+[https://www.uniprot.org/uniprot/Q8ZQM7_SALTY Q8ZQM7_SALTY]
-[[Category: FE]]
+== Evolutionary Conservation ==
-[[Category: ICT]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: SIN]]
+Check<jmol>
-[[Category: antibiotic biosynthesis]]
+  <jmolCheckbox>
-[[Category: mcsg]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cs/2csg_consurf.spt"</scriptWhenChecked>
-[[Category: midwest center for structural genomics]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: mononuclear ferrous enzymes]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: oxidoreductase]]
+  </jmolCheckbox>
-[[Category: penicillin]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2csg ConSurf].
-[[Category: protein structure initiative]]
+<div style="clear:both"></div>
-[[Category: psi]]
+__TOC__
-[[Category: structural genomics]]
+</StructureSection>
+[[Category: Large Structures]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:51:56 2008''
+[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
+[[Category: Collart F]]
+[[Category: Joachimiak A]]
+[[Category: Kim Y]]
+[[Category: Li H]]