2bay: Difference between revisions

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-[[Image:2bay.png|left|200px]]
-{{STRUCTURE_2bay|  PDB=2bay  |  SCENE=  }}
+==Crystal structure of the Prp19 U-box dimer==
+<StructureSection load='2bay' size='340' side='right'caption='[[2bay]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-===Crystal structure of the Prp19 U-box dimer===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2bay]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BAY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BAY FirstGlance]. <br>
-{{ABSTRACT_PUBMED_16388587}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bay OCA], [https://pdbe.org/2bay PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bay RCSB], [https://www.ebi.ac.uk/pdbsum/2bay PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bay ProSAT]</span></td></tr>
-==About this Structure==
+</table>
-[[2bay]] is a 6 chain structure of [[Pre-mRNA-splicing factor]] with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BAY OCA].
+== Function ==
+[https://www.uniprot.org/uniprot/PRP19_YEAST PRP19_YEAST] Involved in pre-mRNA splicing. Acts a central component of the NTC complex (or PRP19-associated complex) that associates to the spliceosome to mediate conformational rearrangement or to stabilize the structure of the spliceosome after U4 snRNA dissociation, which leads to spliceosome maturation. Involved in DNA repair.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ba/2bay_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bay ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Pre-mRNA-splicing factor|Pre-mRNA-splicing factor]]
+*[[Pre-mRNA splicing factors 3D structures|Pre-mRNA splicing factors 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:016388587</ref><references group="xtra"/>
+[[Category: Large Structures]]
 [[Category: Saccharomyces cerevisiae]]
-[[Category: Chazin, W J.]]
+[[Category: Chazin WJ]]
-[[Category: Gould, K L.]]
+[[Category: Gould KL]]
-[[Category: Kooi, C W.Vander.]]
+[[Category: Newcomer ME]]
-[[Category: Newcomer, M E.]]
+[[Category: Ohi MD]]
-[[Category: Ohi, M D.]]
+[[Category: Oldham ML]]
-[[Category: Oldham, M L.]]
+[[Category: Rosenberg JA]]
-[[Category: Rosenberg, J A.]]
+[[Category: Vander Kooi CW]]
-[[Category: E3 ligase]]
-[[Category: Ligase]]
-[[Category: Prp19]]
-[[Category: U-box]]
-[[Category: Ubiquitin ligase]]