2ba0: Difference between revisions

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-{{Seed}}
-[[Image:2ba0.png|left|200px]]
-<!--
+==Archaeal exosome core==
-The line below this paragraph, containing "STRUCTURE_2ba0", creates the "Structure Box" on the page.
+<StructureSection load='2ba0' size='340' side='right'caption='[[2ba0]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2ba0]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BA0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BA0 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ba0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ba0 OCA], [https://pdbe.org/2ba0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ba0 RCSB], [https://www.ebi.ac.uk/pdbsum/2ba0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ba0 ProSAT]</span></td></tr>
-{{STRUCTURE_2ba0|  PDB=2ba0  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/RRP4_ARCFU RRP4_ARCFU] Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome (Probable).<ref>PMID:16285927</ref> <ref>PMID:20392821</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ba/2ba0_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ba0 ConSurf].
+<div style="clear:both"></div>
-===Archaeal exosome core===
+==See Also==
+*[[Exosome 3D structures|Exosome 3D structures]]
+== References ==
-<!--
+<references/>
-The line below this paragraph, {{ABSTRACT_PUBMED_16285927}}, adds the Publication Abstract to the page
+__TOC__
-(as it appears on PubMed at http://www.pubmed.gov), where 16285927 is the PubMed ID number.
+</StructureSection>
--->
-{{ABSTRACT_PUBMED_16285927}}
-==About this Structure==
-BA0 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BA0 OCA].
-==Reference==
-Structural framework for the mechanism of archaeal exosomes in RNA processing., Buttner K, Wenig K, Hopfner KP, Mol Cell. 2005 Nov 11;20(3):461-71. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16285927 16285927]
 [[Category: Archaeoglobus fulgidus]]
-[[Category: Protein complex]]
+[[Category: Large Structures]]
-[[Category: Buttner, K.]]
+[[Category: Buttner K]]
-[[Category: Hopfner, K P.]]
+[[Category: Hopfner KP]]
-[[Category: Wenig, K.]]
+[[Category: Wenig K]]
-[[Category: Archaeal]]
-[[Category: Exoribonuclease]]
-[[Category: Exosome]]
-[[Category: Kh domain]]
-[[Category: Rna binding]]
-[[Category: Rna degradation]]
-[[Category: Rnase ph]]
-[[Category: S1domain]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 16:22:23 2008''