2b0e: Difference between revisions

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[[Image:2b0e.png|left|200px]]


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==EcoRV Restriction Endonuclease/GAAUTC/Ca2+==
The line below this paragraph, containing "STRUCTURE_2b0e", creates the "Structure Box" on the page.
<StructureSection load='2b0e' size='340' side='right'caption='[[2b0e]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2b0e]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B0E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B0E FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
{{STRUCTURE_2b0e|  PDB=2b0e  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b0e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b0e OCA], [https://pdbe.org/2b0e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b0e RCSB], [https://www.ebi.ac.uk/pdbsum/2b0e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b0e ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/T2E5_ECOLX T2E5_ECOLX] Recognizes the double-stranded sequence GATATC and cleaves after T-3.


===EcoRV Restriction Endonuclease/GAAUTC/Ca2+===
==See Also==
 
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
 
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{{ABSTRACT_PUBMED_16236314}}
 
==About this Structure==
2B0E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B0E OCA].
 
==Reference==
Non-cognate enzyme-DNA complex: structural and kinetic analysis of EcoRV endonuclease bound to the EcoRI recognition site GAATTC., Hiller DA, Rodriguez AM, Perona JJ, J Mol Biol. 2005 Nov 18;354(1):121-36. Epub 2005 Oct 3. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16236314 16236314]
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Type II site-specific deoxyribonuclease]]
[[Category: Hiller DA]]
[[Category: Hiller, D A.]]
[[Category: Perona JJ]]
[[Category: Perona, J J.]]
[[Category: Rodriguez AM]]
[[Category: Rodriguez, A M.]]
[[Category: Indirect readout]]
[[Category: Noncognate]]
[[Category: Protein-nucleic acid recognition]]
[[Category: Restriction enzyme]]
[[Category: Substrate specificity]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 16:58:33 2008''

Latest revision as of 12:15, 14 February 2024

EcoRV Restriction Endonuclease/GAAUTC/Ca2+EcoRV Restriction Endonuclease/GAAUTC/Ca2+

Structural highlights

2b0e is a 4 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

T2E5_ECOLX Recognizes the double-stranded sequence GATATC and cleaves after T-3.

See Also

2b0e, resolution 1.90Å

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