256b: Difference between revisions

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New page: left|200px<br /><applet load="256b" size="450" color="white" frame="true" align="right" spinBox="true" caption="256b, resolution 1.4Å" /> '''IMPROVEMENT OF THE 2....
 
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[[Image:256b.jpg|left|200px]]<br /><applet load="256b" size="450" color="white" frame="true" align="right" spinBox="true"
caption="256b, resolution 1.4&Aring;" />
'''IMPROVEMENT OF THE 2.5 ANGSTROMS RESOLUTION MODEL OF CYTOCHROME B562 BY REDETERMINING THE PRIMARY STRUCTURE AND USING MOLECULAR GRAPHICS'''<br />


==About this Structure==
==IMPROVEMENT OF THE 2.5 ANGSTROMS RESOLUTION MODEL OF CYTOCHROME B562 BY REDETERMINING THE PRIMARY STRUCTURE AND USING MOLECULAR GRAPHICS==
256B is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with SO4 and HEM as [http://en.wikipedia.org/wiki/ligands ligands]. This structure superseeds the now removed PDB entry 156B. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=256B OCA].  
<StructureSection load='256b' size='340' side='right'caption='[[256b]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[256b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=156b 156b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=256B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=256B FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=256b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=256b OCA], [https://pdbe.org/256b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=256b RCSB], [https://www.ebi.ac.uk/pdbsum/256b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=256b ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/C562_ECOLX C562_ECOLX] Electron-transport protein of unknown function.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/56/256b_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=256b ConSurf].
<div style="clear:both"></div>


==Reference==
==See Also==
Improvement of the 2.5 A resolution model of cytochrome b562 by redetermining the primary structure and using molecular graphics., Lederer F, Glatigny A, Bethge PH, Bellamy HD, Matthew FS, J Mol Biol. 1981 Jun 5;148(4):427-48. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=7031264 7031264]
*[[Cytochrome b5 3D structures|Cytochrome b5 3D structures]]
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Bethge, P.H.]]
[[Category: Bethge PH]]
[[Category: Hamada, K.]]
[[Category: Hamada K]]
[[Category: Mathews, F.S.]]
[[Category: Mathews FS]]
[[Category: HEM]]
[[Category: SO4]]
[[Category: electron transport]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 07:50:07 2007''

Latest revision as of 12:09, 14 February 2024

IMPROVEMENT OF THE 2.5 ANGSTROMS RESOLUTION MODEL OF CYTOCHROME B562 BY REDETERMINING THE PRIMARY STRUCTURE AND USING MOLECULAR GRAPHICSIMPROVEMENT OF THE 2.5 ANGSTROMS RESOLUTION MODEL OF CYTOCHROME B562 BY REDETERMINING THE PRIMARY STRUCTURE AND USING MOLECULAR GRAPHICS

Structural highlights

256b is a 2 chain structure with sequence from Escherichia coli. This structure supersedes the now removed PDB entry 156b. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.4Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

C562_ECOLX Electron-transport protein of unknown function.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

256b, resolution 1.40Å

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