1zk3: Difference between revisions

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[[Image:1zk3.png|left|200px]]


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==Triclinic crystal structure of the apo-form of R-specific alcohol dehydrogenase (mutant G37D) from Lactobacillus brevis==
The line below this paragraph, containing "STRUCTURE_1zk3", creates the "Structure Box" on the page.
<StructureSection load='1zk3' size='340' side='right'caption='[[1zk3]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1zk3]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis Levilactobacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZK3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZK3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_1zk3| PDB=1zk3 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zk3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zk3 OCA], [https://pdbe.org/1zk3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zk3 RCSB], [https://www.ebi.ac.uk/pdbsum/1zk3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zk3 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q84EX5_LEVBR Q84EX5_LEVBR]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zk/1zk3_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zk3 ConSurf].
<div style="clear:both"></div>


===Triclinic crystal structure of the apo-form of R-specific alcohol dehydrogenase (mutant G37D) from Lactobacillus brevis===
==See Also==
 
*[[Alcohol dehydrogenase 3D structures|Alcohol dehydrogenase 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_15896805}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 15896805 is the PubMed ID number.
[[Category: Levilactobacillus brevis]]
-->
[[Category: Hummel W]]
{{ABSTRACT_PUBMED_15896805}}
[[Category: Muller J]]
 
[[Category: Niefind K]]
==About this Structure==
[[Category: Riebel B]]
[[1zk3]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_brevis Lactobacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZK3 OCA].
[[Category: Schlieben NH]]
 
[[Category: Schomburg D]]
==Reference==
<ref group="xtra">PMID:15896805</ref><ref group="xtra">PMID:12628239</ref><ref group="xtra">PMID:11092950</ref><references group="xtra"/>
[[Category: Lactobacillus brevis]]
[[Category: Hummel, W.]]
[[Category: Muller, J.]]
[[Category: Niefind, K.]]
[[Category: Riebel, B.]]
[[Category: Schlieben, N H.]]
[[Category: Schomburg, D.]]
[[Category: Magnesium dependence]]
[[Category: Oxidoreductase]]
[[Category: R-specific alcohol dehydrogenase]]
[[Category: Short chain reductases/dehydrogenase]]

Latest revision as of 12:05, 14 February 2024

Triclinic crystal structure of the apo-form of R-specific alcohol dehydrogenase (mutant G37D) from Lactobacillus brevisTriclinic crystal structure of the apo-form of R-specific alcohol dehydrogenase (mutant G37D) from Lactobacillus brevis

Structural highlights

1zk3 is a 8 chain structure with sequence from Levilactobacillus brevis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q84EX5_LEVBR

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1zk3, resolution 2.20Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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