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==Crystal structure of the C-terminal domain of E. coli transcriptional regulator KdgR.== | ==Crystal structure of the C-terminal domain of E. coli transcriptional regulator KdgR.== | ||
<StructureSection load='1ysp' size='340' side='right' caption='[[1ysp]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='1ysp' size='340' side='right'caption='[[1ysp]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1ysp]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[1ysp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YSP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YSP FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ysp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ysp OCA], [https://pdbe.org/1ysp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ysp RCSB], [https://www.ebi.ac.uk/pdbsum/1ysp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ysp ProSAT], [https://www.topsan.org/Proteins/MCSG/1ysp TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/KDGR_ECOLI KDGR_ECOLI] Transcriptional regulator of the kdgK gene for the kdg kinase and the kdgT gene for the kdg permease. | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/1ysp_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/1ysp_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ysp ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Escherichia coli]] | ||
[[Category: Bochkarev | [[Category: Large Structures]] | ||
[[Category: Borek | [[Category: Bochkarev A]] | ||
[[Category: Evdokimova | [[Category: Borek D]] | ||
[[Category: Ezersky | [[Category: Evdokimova E]] | ||
[[Category: Joachimiak | [[Category: Ezersky A]] | ||
[[Category: Lunin | [[Category: Joachimiak A]] | ||
[[Category: Lunin VV]] | |||
[[Category: Savchenko | [[Category: Savchenko A]] | ||
[[Category: Skarina | [[Category: Skarina T]] | ||
[[Category: Xu | [[Category: Xu X]] | ||
Latest revision as of 11:59, 14 February 2024
Crystal structure of the C-terminal domain of E. coli transcriptional regulator KdgR.Crystal structure of the C-terminal domain of E. coli transcriptional regulator KdgR.
Structural highlights
FunctionKDGR_ECOLI Transcriptional regulator of the kdgK gene for the kdg kinase and the kdgT gene for the kdg permease. Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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