1y1x: Difference between revisions

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[[Image:1y1x.png|left|200px]]


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==Structural analysis of a homolog of programmed cell death 6 protein from Leishmania major Friedlin==
The line below this paragraph, containing "STRUCTURE_1y1x", creates the "Structure Box" on the page.
<StructureSection load='1y1x' size='340' side='right'caption='[[1y1x]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1y1x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_major_strain_Friedlin Leishmania major strain Friedlin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y1X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y1X FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1y1x|  PDB=1y1x |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y1x OCA], [https://pdbe.org/1y1x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y1x RCSB], [https://www.ebi.ac.uk/pdbsum/1y1x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y1x ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q4QG08_LEIMA Q4QG08_LEIMA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y1/1y1x_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y1x ConSurf].
<div style="clear:both"></div>


===Structural analysis of a homolog of programmed cell death 6 protein from Leishmania major Friedlin===
==See Also==
 
*[[Cell death protein 3D structures|Cell death protein 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
[[1y1x]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y1X OCA].
[[Category: Large Structures]]
[[Category: Leishmania major]]
[[Category: Leishmania major strain Friedlin]]
[[Category: Hol, W G.J.]]
[[Category: Hol WGJ]]
[[Category: Robien, M A.]]
[[Category: Robien MA]]
[[Category: SGPP, Structural Genomics of Pathogenic Protozoa Consortium.]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Sgpp]]
[[Category: Structural genomic]]
[[Category: Structural genomics of pathogenic protozoa consortium]]
[[Category: Unknown function]]

Latest revision as of 11:54, 14 February 2024

Structural analysis of a homolog of programmed cell death 6 protein from Leishmania major FriedlinStructural analysis of a homolog of programmed cell death 6 protein from Leishmania major Friedlin

Structural highlights

1y1x is a 2 chain structure with sequence from Leishmania major strain Friedlin. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.95Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q4QG08_LEIMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1y1x, resolution 1.95Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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