1xx7: Difference between revisions

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-[[Image:1xx7.jpg|left|200px]]
-<!--
+==Conserved hypothetical protein from Pyrococcus furiosus Pfu-403030-001==
-The line below this paragraph, containing "STRUCTURE_1xx7", creates the "Structure Box" on the page.
+<StructureSection load='1xx7' size='340' side='right'caption='[[1xx7]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1xx7]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XX7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XX7 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.261&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
-{{STRUCTURE_1xx7|  PDB=1xx7  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xx7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xx7 OCA], [https://pdbe.org/1xx7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xx7 RCSB], [https://www.ebi.ac.uk/pdbsum/1xx7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xx7 ProSAT], [https://www.topsan.org/Proteins/SECSG/1xx7 TOPSAN]</span></td></tr>
+</table>
-'''Conserved hypothetical protein from Pyrococcus furiosus Pfu-403030-001'''
+== Function ==
+[https://www.uniprot.org/uniprot/Q8U3R1_PYRFU Q8U3R1_PYRFU]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-XX7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XX7 OCA].
+Check<jmol>
-[[Category: Pyrococcus furiosus]]
+  <jmolCheckbox>
-[[Category: Single protein]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xx/1xx7_consurf.spt"</scriptWhenChecked>
-[[Category: Adams, M W.W.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Bridger, S.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Chang, S H.]]
+  </jmolCheckbox>
-[[Category: Chen, L.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xx7 ConSurf].
-[[Category: Dillard, B D.]]
+<div style="clear:both"></div>
-[[Category: Eneh, J C.]]
+__TOC__
-[[Category: Habel, J.]]
+</StructureSection>
-[[Category: Hopkins, R C.]]
+[[Category: Large Structures]]
-[[Category: II, F L.Poole.]]
-[[Category: III, W B.Arendall.]]
-[[Category: Jr, F E.Jenney.]]
-[[Category: Kelley, L L.C.]]
-[[Category: Lee, D.]]
-[[Category: Lee, H S.]]
-[[Category: Li, T.]]
-[[Category: Liu, Z J.]]
-[[Category: Nguyen, D.]]
-[[Category: Richardson, D C.]]
-[[Category: Richardson, J S.]]
-[[Category: Rose, J P.]]
-[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
-[[Category: Shah, C.]]
-[[Category: Sugar, F J.]]
-[[Category: Tempel, W.]]
-[[Category: Wang, B C.]]
-[[Category: Zhou, W.]]
-[[Category: Conserved hypothetical protein]]
-[[Category: Hyperthermophile]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
 [[Category: Pyrococcus furiosus]]
-[[Category: Secsg]]
+[[Category: Adams MWW]]
-[[Category: Southeast collaboratory for structural genomic]]
+[[Category: Arendall III WB]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 15:37:06 2008''
+[[Category: Bridger S]]
+[[Category: Chang S-H]]
+[[Category: Chen L]]
+[[Category: Dillard BD]]
+[[Category: Eneh JC]]
+[[Category: Habel J]]
+[[Category: Hopkins RC]]
+[[Category: Jenney Jr FE]]
+[[Category: Kelley L-LC]]
+[[Category: Lee D]]
+[[Category: Lee H-S]]
+[[Category: Li T]]
+[[Category: Liu Z-J]]
+[[Category: Nguyen D]]
+[[Category: Poole II FL]]
+[[Category: Richardson DC]]
+[[Category: Richardson JS]]
+[[Category: Rose JP]]
+[[Category: Shah C]]
+[[Category: Sugar FJ]]
+[[Category: Tempel W]]
+[[Category: Wang B-C]]
+[[Category: Zhou W]]