1xx7: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==Conserved hypothetical protein from Pyrococcus furiosus Pfu-403030-001==
-<StructureSection load='1xx7' size='340' side='right' caption='[[1xx7]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
+<StructureSection load='1xx7' size='340' side='right'caption='[[1xx7]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1xx7]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43587 Atcc 43587]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XX7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XX7 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1xx7]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XX7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XX7 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.261&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xx7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xx7 OCA], [http://pdbe.org/1xx7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xx7 RCSB], [http://www.ebi.ac.uk/pdbsum/1xx7 PDBsum], [http://www.topsan.org/Proteins/SECSG/1xx7 TOPSAN]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xx7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xx7 OCA], [https://pdbe.org/1xx7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xx7 RCSB], [https://www.ebi.ac.uk/pdbsum/1xx7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xx7 ProSAT], [https://www.topsan.org/Proteins/SECSG/1xx7 TOPSAN]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q8U3R1_PYRFU Q8U3R1_PYRFU]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xx/1xx7_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xx/1xx7_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xx7 ConSurf].
 <div style="clear:both"></div>
 __TOC__
 </StructureSection>
-[[Category: Atcc 43587]]
+[[Category: Large Structures]]
-[[Category: Adams, M W.W]]
-[[Category: Bridger, S]]
-[[Category: Chang, S H]]
-[[Category: Chen, L]]
-[[Category: Dillard, B D]]
-[[Category: Eneh, J C]]
-[[Category: Habel, J]]
-[[Category: Hopkins, R C]]
-[[Category: II, F L.Poole]]
-[[Category: III, W B.Arendall]]
-[[Category: Jr, F E.Jenney]]
-[[Category: Kelley, L L.C]]
-[[Category: Lee, D]]
-[[Category: Lee, H S]]
-[[Category: Li, T]]
-[[Category: Liu, Z J]]
-[[Category: Nguyen, D]]
-[[Category: Richardson, D C]]
-[[Category: Richardson, J S]]
-[[Category: Rose, J P]]
-[[Category: Structural genomic]]
-[[Category: Shah, C]]
-[[Category: Sugar, F J]]
-[[Category: Tempel, W]]
-[[Category: Wang, B C]]
-[[Category: Zhou, W]]
-[[Category: Conserved hypothetical protein]]
-[[Category: Hyperthermophile]]
-[[Category: PSI, Protein structure initiative]]
 [[Category: Pyrococcus furiosus]]
-[[Category: Secsg]]
+[[Category: Adams MWW]]
-[[Category: Unknown function]]
+[[Category: Arendall III WB]]
+[[Category: Bridger S]]
+[[Category: Chang S-H]]
+[[Category: Chen L]]
+[[Category: Dillard BD]]
+[[Category: Eneh JC]]
+[[Category: Habel J]]
+[[Category: Hopkins RC]]
+[[Category: Jenney Jr FE]]
+[[Category: Kelley L-LC]]
+[[Category: Lee D]]
+[[Category: Lee H-S]]
+[[Category: Li T]]
+[[Category: Liu Z-J]]
+[[Category: Nguyen D]]
+[[Category: Poole II FL]]
+[[Category: Richardson DC]]
+[[Category: Richardson JS]]
+[[Category: Rose JP]]
+[[Category: Shah C]]
+[[Category: Sugar FJ]]
+[[Category: Tempel W]]
+[[Category: Wang B-C]]
+[[Category: Zhou W]]