1xm8: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:1xm8.jpg|left|200px]]<br /><applet load="1xm8" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1xm8, resolution 1.74&Aring;" />
-'''X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350'''<br />
-==About this Structure==
+==X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350==
-XM8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana] with ZN, FE, ACY and PEG as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Hydroxyacylglutathione_hydrolase Hydroxyacylglutathione hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.2.6 3.1.2.6] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1XM8 OCA].
+<StructureSection load='1xm8' size='340' side='right'caption='[[1xm8]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1xm8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XM8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XM8 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xm8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xm8 OCA], [https://pdbe.org/1xm8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xm8 RCSB], [https://www.ebi.ac.uk/pdbsum/1xm8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xm8 ProSAT], [https://www.topsan.org/Proteins/CESG/1xm8 TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/GLO2N_ARATH GLO2N_ARATH] Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.<ref>PMID:16227621</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xm/1xm8_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xm8 ConSurf].
+<div style="clear:both"></div>
+==See Also==
+*[[Glyoxalase 3D structures|Glyoxalase 3D structures]]
+== References ==
+<references/>
+__TOC__
+</StructureSection>
 [[Category: Arabidopsis thaliana]]
-[[Category: Hydroxyacylglutathione hydrolase]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Allard STM]]
-[[Category: Allard, S.T.M.]]
+[[Category: Bingman CA]]
-[[Category: Bingman, C.A.]]
+[[Category: Bitto E]]
-[[Category: Bitto, E.]]
+[[Category: Phillips Jr GN]]
-[[Category: CESG, Center.for.Eukaryotic.Structural.Genomics.]]
+[[Category: Smith DW]]
-[[Category: Jr., G.N.Phillips.]]
+[[Category: Wesenberg GE]]
-[[Category: Smith, D.W.]]
-[[Category: Wesenberg, G.E.]]
-[[Category: ACY]]
-[[Category: FE]]
-[[Category: PEG]]
-[[Category: ZN]]
-[[Category: at2g31350]]
-[[Category: b-lactamase fold]]
-[[Category: center for eukaryotic structural genomics]]
-[[Category: cesg]]
-[[Category: metallo-hydrolase]]
-[[Category: mitochondrial isozyme]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-[[Category: structural genomics]]
-[[Category: thioester hydrolase]]
-[[Category: zinc/iron binuclear center]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 06:10:20 2007''