1urp: Difference between revisions

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-{{Seed}}
-[[Image:1urp.png|left|200px]]
-<!--
+==D-RIBOSE-BINDING PROTEIN FROM ESCHERICHIA COLI==
-The line below this paragraph, containing "STRUCTURE_1urp", creates the "Structure Box" on the page.
+<StructureSection load='1urp' size='340' side='right'caption='[[1urp]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1urp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1URP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1URP FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1urp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1urp OCA], [https://pdbe.org/1urp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1urp RCSB], [https://www.ebi.ac.uk/pdbsum/1urp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1urp ProSAT]</span></td></tr>
-{{STRUCTURE_1urp|  PDB=1urp  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/RBSB_ECOLI RBSB_ECOLI] Involved in the high-affinity D-ribose membrane transport system and also serves as the primary chemoreceptor for chemotaxis.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ur/1urp_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1urp ConSurf].
+<div style="clear:both"></div>
-===D-RIBOSE-BINDING PROTEIN FROM ESCHERICHIA COLI===
+==See Also==
+*[[Ribose-binding protein|Ribose-binding protein]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_9641984}}, adds the Publication Abstract to the page
+[[Category: Escherichia coli K-12]]
-(as it appears on PubMed at http://www.pubmed.gov), where 9641984 is the PubMed ID number.
+[[Category: Large Structures]]
--->
+[[Category: Bjorkman AJ]]
-{{ABSTRACT_PUBMED_9641984}}
+[[Category: Mowbray SL]]
-==About this Structure==
-URP is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1URP OCA].
-==Reference==
-<ref group="xtra">PMID:9641984</ref><references group="xtra"/>
-[[Category: Escherichia coli]]
-[[Category: Bjorkman, A J.]]
-[[Category: Mowbray, S L.]]
-[[Category: Chemotaxis]]
-[[Category: Periplasm]]
-[[Category: Transport]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 15:34:30 2009''