1u3g: Difference between revisions

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-{{Seed}}
-[[Image:1u3g.png|left|200px]]
-<!--
+==Structural and Functional Characterization of a 5,10-Methenyltetrahydrofolate Synthetase from Mycoplasma pneumoniae (GI: 13508087)==
-The line below this paragraph, containing "STRUCTURE_1u3g", creates the "Structure Box" on the page.
+<StructureSection load='1u3g' size='340' side='right'caption='[[1u3g]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1u3g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycoplasma_pneumoniae Mycoplasma pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U3G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U3G FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=THF:5-HYDROXYMETHYLENE-6-HYDROFOLIC+ACID'>THF</scene></td></tr>
-{{STRUCTURE_1u3g|  PDB=1u3g  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u3g OCA], [https://pdbe.org/1u3g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u3g RCSB], [https://www.ebi.ac.uk/pdbsum/1u3g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u3g ProSAT], [https://www.topsan.org/Proteins/BSGC/1u3g TOPSAN]</span></td></tr>
+</table>
-===Structural and Functional Characterization of a 5,10-Methenyltetrahydrofolate Synthetase from Mycoplasma pneumoniae (GI: 13508087)===
+== Function ==
+[https://www.uniprot.org/uniprot/MTHFS_MYCPN MTHFS_MYCPN] Involved in folate metabolism. Catalyzes the irreversible conversion of 5-formyltetrahydrofolate (5-FTHF) to yield 5,10-methenyltetrahydrofolate.<ref>PMID:16104022</ref>
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-U3G is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mycoplasma_pneumoniae Mycoplasma pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U3G OCA].
+Check<jmol>
+  <jmolCheckbox>
-==Reference==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u3/1u3g_consurf.spt"</scriptWhenChecked>
-Crystal structure of methenyltetrahydrofolate synthetase from Mycoplasma pneumoniae (GI: 13508087) at 2.2 A resolution., Chen S, Shin DH, Pufan R, Kim R, Kim SH, Proteins. 2004 Sep 1;56(4):839-43. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15281135 15281135]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: 5-formyltetrahydrofolate cyclo-ligase]]
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1u3g ConSurf].
+<div style="clear:both"></div>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Mycoplasma pneumoniae]]
-[[Category: Single protein]]
+[[Category: Chen S]]
-[[Category: BSGC, Berkeley Structural Genomics Center.]]
+[[Category: Kim R]]
-[[Category: Chen, S.]]
+[[Category: Kim S-H]]
-[[Category: Kim, R.]]
+[[Category: Proudfoot M]]
-[[Category: Kim, S H.]]
+[[Category: Yakunin AF]]
-[[Category: Proudfoot, M.]]
-[[Category: Yakunin, A F.]]
-[[Category: 5,10-methenyltetrahydrofolate synthetase]]
-[[Category: Atp binding]]
-[[Category: Berkeley structural genomics center]]
-[[Category: Bsgc structure funded by nih]]
-[[Category: Ligase]]
-[[Category: Mthf]]
-[[Category: Mycoplasma pneumoniae]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 09:26:20 2008''