1tvl: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1tvl.png|left|200px]]


{{STRUCTURE_1tvl|  PDB=1tvl  |  SCENE=  }}
==Structure of YTNJ from Bacillus subtilis==
 
<StructureSection load='1tvl' size='340' side='right'caption='[[1tvl]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
===Structure of YTNJ from Bacillus subtilis===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1tvl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TVL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TVL FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.104&#8491;</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tvl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tvl OCA], [https://pdbe.org/1tvl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tvl RCSB], [https://www.ebi.ac.uk/pdbsum/1tvl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tvl ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1tvl TOPSAN]</span></td></tr>
[[1tvl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TVL OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/MOXC_BACSU MOXC_BACSU] May play a role in methionine degradation. May play a role in a sulfur salvage pathway.<ref>PMID:11423008</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tv/1tvl_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tvl ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Burley, S K.]]
[[Category: Large Structures]]
[[Category: Gorman, J.]]
[[Category: Burley SK]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Gorman J]]
[[Category: Shapiro, L.]]
[[Category: Shapiro L]]
[[Category: Beta-alpha barrel]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nysgxrc]]
[[Category: Oxidoreductase]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]

Latest revision as of 11:42, 14 February 2024

Structure of YTNJ from Bacillus subtilisStructure of YTNJ from Bacillus subtilis

Structural highlights

1tvl is a 1 chain structure with sequence from Bacillus subtilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.104Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

MOXC_BACSU May play a role in methionine degradation. May play a role in a sulfur salvage pathway.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

References

  1. ↑ Sekowska A, Robin S, Daudin JJ, Henaut A, Danchin A. Extracting biological information from DNA arrays: an unexpected link between arginine and methionine metabolism in Bacillus subtilis. Genome Biol. 2001;2(6):RESEARCH0019. Epub 2001 Jun 1. PMID:11423008

1tvl, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=1tvl&oldid=4055726"