1tt4: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:1tt4.jpg|left|200px]]<br /><applet load="1tt4" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1tt4, resolution 2.801&Aring;" />
-'''Structure of NP459575, a predicted glutathione synthase from Salmonella typhimurium'''<br />
-==About this Structure==
+==Structure of NP459575, a predicted glutathione synthase from Salmonella typhimurium==
-TT4 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium_lt2 Salmonella typhimurium lt2] with MG and SO4 as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1TT4 OCA].
+<StructureSection load='1tt4' size='340' side='right'caption='[[1tt4]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-[[Category: Salmonella typhimurium lt2]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[1tt4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TT4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TT4 FirstGlance]. <br>
-[[Category: Anderson, W.F.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.801&#8491;</td></tr>
-[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-[[Category: Miller, D.J.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tt4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tt4 OCA], [https://pdbe.org/1tt4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tt4 RCSB], [https://www.ebi.ac.uk/pdbsum/1tt4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tt4 ProSAT], [https://www.topsan.org/Proteins/MCSG/1tt4 TOPSAN]</span></td></tr>
-[[Category: Shuvalova, L.]]
+</table>
-[[Category: MG]]
+== Function ==
-[[Category: SO4]]
+[https://www.uniprot.org/uniprot/GCS2_SALTY GCS2_SALTY] ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity.[HAMAP-Rule:MF_01609]
-[[Category: glutathione synthase]]
+== Evolutionary Conservation ==
-[[Category: mcsg]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: midwest center for structural genomics]]
+Check<jmol>
-[[Category: np459575]]
+  <jmolCheckbox>
-[[Category: protein structure initiative]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tt/1tt4_consurf.spt"</scriptWhenChecked>
-[[Category: psi]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: structural genomics]]
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 03:34:26 2007''
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tt4 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
+[[Category: Anderson WF]]
+[[Category: Miller DJ]]
+[[Category: Shuvalova L]]