1tc5: Difference between revisions

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[[Image:1tc5.png|left|200px]]


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==Structural Analysis of a probable eukaryotic D-amino acid tRNA deacylase==
The line below this paragraph, containing "STRUCTURE_1tc5", creates the "Structure Box" on the page.
<StructureSection load='1tc5' size='340' side='right'caption='[[1tc5]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1tc5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TC5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tc5 OCA], [https://pdbe.org/1tc5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tc5 RCSB], [https://www.ebi.ac.uk/pdbsum/1tc5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tc5 ProSAT]</span></td></tr>
{{STRUCTURE_1tc5|  PDB=1tc5  |  SCENE=  }}
</table>
 
== Function ==
===Structural Analysis of a probable eukaryotic D-amino acid tRNA deacylase===
[https://www.uniprot.org/uniprot/DTD2_LEIMA DTD2_LEIMA]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
[[1tc5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TC5 OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tc/1tc5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tc5 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Leishmania major]]
[[Category: Leishmania major]]
[[Category: Hol, W G.J.]]
[[Category: Hol WGJ]]
[[Category: Robien, M A.]]
[[Category: Robien MA]]
[[Category: SGPP, Structural Genomics of Pathogenic Protozoa Consortium.]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Sgpp]]
[[Category: Structural genomic]]
[[Category: Structural genomics of pathogenic protozoa consortium]]
[[Category: Unknown function]]

Latest revision as of 11:38, 14 February 2024

Structural Analysis of a probable eukaryotic D-amino acid tRNA deacylaseStructural Analysis of a probable eukaryotic D-amino acid tRNA deacylase

Structural highlights

1tc5 is a 4 chain structure with sequence from Leishmania major. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.93Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

DTD2_LEIMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1tc5, resolution 1.93Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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