1t6y: Difference between revisions

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[[Image:1t6y.gif|left|200px]]


{{Structure
==Crystal structure of ADP, AMP, and FMN bound TM379==
|PDB= 1t6y |SIZE=350|CAPTION= <scene name='initialview01'>1t6y</scene>, resolution 2.80&Aring;
<StructureSection load='1t6y' size='340' side='right'caption='[[1t6y]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5&#39;-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene> and <scene name='pdbligand=FMN:FLAVIN MONONUCLEOTIDE'>FMN</scene>
<table><tr><td colspan='2'>[[1t6y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T6Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T6Y FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t6y OCA], [https://pdbe.org/1t6y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t6y RCSB], [https://www.ebi.ac.uk/pdbsum/1t6y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t6y ProSAT], [https://www.topsan.org/Proteins/BSGC/1t6y TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of ADP, AMP, and FMN bound TM379'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q9WZW1_THEMA Q9WZW1_THEMA]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1T6Y is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T6Y OCA].  
Check<jmol>
[[Category: Single protein]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t6/1t6y_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t6y ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: BSGC, Berkeley Structural Genomics Center.]]
[[Category: Kim R]]
[[Category: Kim, R.]]
[[Category: Kim S-H]]
[[Category: Kim, S H.]]
[[Category: Shin DH]]
[[Category: Shin, D H.]]
[[Category: Wang W]]
[[Category: Wang, W.]]
[[Category: Yokota H]]
[[Category: Yokota, H.]]
[[Category: ADP]]
[[Category: AMP]]
[[Category: FMN]]
[[Category: berkeley structural genomics center]]
[[Category: bsgc structure funded by nih]]
[[Category: crystal; fad synthetase; adp; amp; fmn; x-ray crystallography; structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 13:42:07 2008''

Latest revision as of 11:36, 14 February 2024

Crystal structure of ADP, AMP, and FMN bound TM379Crystal structure of ADP, AMP, and FMN bound TM379

Structural highlights

1t6y is a 2 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.8Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9WZW1_THEMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1t6y, resolution 2.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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