1t5k: Difference between revisions

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-[[Image:1t5k.png|left|200px]]
-{{STRUCTURE_1t5k|  PDB=1t5k  |  SCENE=  }}
+==Crystal structure of amicyanin substituted with cobalt==
+<StructureSection load='1t5k' size='340' side='right'caption='[[1t5k]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1t5k]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Paracoccus_denitrificans Paracoccus denitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T5K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T5K FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t5k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t5k OCA], [https://pdbe.org/1t5k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t5k RCSB], [https://www.ebi.ac.uk/pdbsum/1t5k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t5k ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/AMCY_PARDE AMCY_PARDE] Primary acceptor of electrons from methylamine dehydrogenase. Passes those electrons on either a soluble cytochrome c or to pseudoazurin.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t5/1t5k_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t5k ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of amicyanin substituted with cobalt===
+==See Also==
+*[[Amicyanin 3D structures|Amicyanin 3D structures]]
-{{ABSTRACT_PUBMED_15260481}}
+__TOC__
+</StructureSection>
-==About this Structure==
+[[Category: Large Structures]]
-[[1t5k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Paracoccus_denitrificans Paracoccus denitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T5K OCA].
-==Reference==
-<ref group="xtra">PMID:015260481</ref><references group="xtra"/>
 [[Category: Paracoccus denitrificans]]
-[[Category: Carrell, C J.]]
+[[Category: Carrell CJ]]
-[[Category: Davidson, V L.]]
+[[Category: Davidson VL]]
-[[Category: Jarrett, W L.]]
+[[Category: Jarrett WL]]
-[[Category: Jones, L.]]
+[[Category: Jones L]]
-[[Category: Mathews, F S.]]
+[[Category: Mathews FS]]
-[[Category: Wang, X.]]
+[[Category: Wang X]]
-[[Category: Electron transport]]