1sru: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:1sru.png|left|200px]]
-<!--
+==Crystal structure of full length E. coli SSB protein==
-The line below this paragraph, containing "STRUCTURE_1sru", creates the "Structure Box" on the page.
+<StructureSection load='1sru' size='340' side='right'caption='[[1sru]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1sru]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SRU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SRU FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sru FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sru OCA], [https://pdbe.org/1sru PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sru RCSB], [https://www.ebi.ac.uk/pdbsum/1sru PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sru ProSAT]</span></td></tr>
-{{STRUCTURE_1sru|  PDB=1sru  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/SSB_ECOLI SSB_ECOLI] This protein is essential for replication of the chromosomes and its single-stranded DNA phages. It is also involved in DNA recombination and repair.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sr/1sru_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sru ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of full length E. coli SSB protein===
+==See Also==
+*[[Single-stranded DNA-binding protein 3D structures|Single-stranded DNA-binding protein 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_15169953}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 15169953 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_15169953}}
-==About this Structure==
-SRU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SRU OCA].
-==Reference==
-The C-terminal domain of full-length E. coli SSB is disordered even when bound to DNA., Savvides SN, Raghunathan S, Futterer K, Kozlov AG, Lohman TM, Waksman G, Protein Sci. 2004 Jul;13(7):1942-7. Epub 2004 May 28. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15169953 15169953]
 [[Category: Escherichia coli]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Fuetterer, K.]]
+[[Category: Fuetterer K]]
-[[Category: Kozlov, A G.]]
+[[Category: Kozlov AG]]
-[[Category: Lohman, T M.]]
+[[Category: Lohman TM]]
-[[Category: Raghunathan, S.]]
+[[Category: Raghunathan S]]
-[[Category: Savvides, S N.]]
+[[Category: Savvides SN]]
-[[Category: Waksman, G.]]
+[[Category: Waksman G]]
-[[Category: Replication]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 15:22:57 2008''