1smk: Difference between revisions

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[[Image:1smk.png|left|200px]]


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==Mature and translocatable forms of glyoxysomal malate dehydrogenase have different activities and stabilities but similar crystal structures==
The line below this paragraph, containing "STRUCTURE_1smk", creates the "Structure Box" on the page.
<StructureSection load='1smk' size='340' side='right'caption='[[1smk]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1smk]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Citrullus_lanatus Citrullus lanatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SMK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SMK FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene></td></tr>
{{STRUCTURE_1smk|  PDB=1smk  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1smk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1smk OCA], [https://pdbe.org/1smk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1smk RCSB], [https://www.ebi.ac.uk/pdbsum/1smk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1smk ProSAT]</span></td></tr>
 
</table>
===Mature and translocatable forms of glyoxysomal malate dehydrogenase have different activities and stabilities but similar crystal structures===
== Function ==
 
[https://www.uniprot.org/uniprot/MDHG_CITLA MDHG_CITLA]
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_15670147}}, adds the Publication Abstract to the page
Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sm/1smk_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_15670147}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[1smk]] is a 8 chain structure of [[Malate dehydrogenase]] with sequence from [http://en.wikipedia.org/wiki/Citrullus_lanatus Citrullus lanatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SMK OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1smk ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Malate dehydrogenase]]
*[[Malate Dehydrogenase 3D structures|Malate Dehydrogenase 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:15670147</ref><references group="xtra"/>
[[Category: Citrullus lanatus]]
[[Category: Citrullus lanatus]]
[[Category: Malate dehydrogenase]]
[[Category: Large Structures]]
[[Category: Bailey, J.]]
[[Category: Bailey J]]
[[Category: Banaszak, L.]]
[[Category: Banaszak L]]
[[Category: Bell, E.]]
[[Category: Bell E]]
[[Category: Chit, M M.]]
[[Category: Chit MM]]
[[Category: Cox, B.]]
[[Category: Cox B]]
[[Category: Gietl, C.]]
[[Category: Gietl C]]
[[Category: Weaver, T.]]
[[Category: Weaver T]]
[[Category: Glyoxylate bypass]]
[[Category: Glyoxysome]]
[[Category: Nad]]
[[Category: Oxidoreductase]]
[[Category: Tricarboxylic cycle]]

Latest revision as of 11:32, 14 February 2024

Mature and translocatable forms of glyoxysomal malate dehydrogenase have different activities and stabilities but similar crystal structuresMature and translocatable forms of glyoxysomal malate dehydrogenase have different activities and stabilities but similar crystal structures

Structural highlights

1smk is a 8 chain structure with sequence from Citrullus lanatus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MDHG_CITLA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1smk, resolution 2.50Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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