1s7c: Difference between revisions

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-[[Image:1s7c.gif|left|200px]]
- {{Structure
+==Crystal structure of MES buffer bound form of glyceraldehyde 3-phosphate dehydrogenase from Escherichia coli==
-|PDB= 1s7c |SIZE=350|CAPTION= <scene name='initialview01'>1s7c</scene>, resolution 2.04&Aring;
+<StructureSection load='1s7c' size='340' side='right'caption='[[1s7c]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID'>MES</scene>
+<table><tr><td colspan='2'>[[1s7c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S7C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S7C FirstGlance]. <br>
-|ACTIVITY= [http://en.wikipedia.org/wiki/Glyceraldehyde-3-phosphate_dehydrogenase_(phosphorylating) Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.12 1.2.1.12]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04&#8491;</td></tr>
-|GENE= gapA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-}}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s7c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s7c OCA], [https://pdbe.org/1s7c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s7c RCSB], [https://www.ebi.ac.uk/pdbsum/1s7c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s7c ProSAT], [https://www.topsan.org/Proteins/BSGC/1s7c TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/G3P1_ECOLI G3P1_ECOLI]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/s7/1s7c_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s7c ConSurf].
+<div style="clear:both"></div>
-'''Crystal structure of MES buffer bound form of glyceraldehyde 3-phosphate dehydrogenase from Escherichia coli'''
+==See Also==
+*[[Aldehyde dehydrogenase 3D structures|Aldehyde dehydrogenase 3D structures]]
+*[[Glyceraldehyde-3-phosphate dehydrogenase 3D structures|Glyceraldehyde-3-phosphate dehydrogenase 3D structures]]
-==About this Structure==
+__TOC__
-S7C is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S7C OCA].
+</StructureSection>
 [[Category: Escherichia coli]]
-[[Category: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Kim R]]
-[[Category: BSGC, Berkeley Structural Genomics Center.]]
+[[Category: Kim SH]]
-[[Category: Kim, R.]]
+[[Category: Shin DH]]
-[[Category: Kim, S H.]]
+[[Category: Thor J]]
-[[Category: Shin, D H.]]
+[[Category: Yokota H]]
-[[Category: Thor, J.]]
-[[Category: Yokota, H.]]
-[[Category: MES]]
-[[Category: SO4]]
-[[Category: berkeley structural genomics center]]
-[[Category: bsgc structure funded by nih]]
-[[Category: hypothetical]]
-[[Category: oxidoreductase]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-[[Category: structural genomic]]
-[[Category: x-ray crytsallography]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:01:24 2008''