1s4m: Difference between revisions

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[[Image:1s4m.jpg|left|200px]]


{{Structure
==Crystal structure of flavin binding to FAD synthetase from Thermotoga maritina==
|PDB= 1s4m |SIZE=350|CAPTION= <scene name='initialview01'>1s4m</scene>, resolution 2.1&Aring;
<StructureSection load='1s4m' size='340' side='right'caption='[[1s4m]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
|SITE=
== Structural highlights ==
|LIGAND= <scene name='pdbligand=LUM:LUMICHROME'>LUM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
<table><tr><td colspan='2'>[[1s4m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S4M FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
|GENE=
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LUM:LUMICHROME'>LUM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02064 Flavokinase_C], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0196 RibF], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01687 Flavokinase]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s4m OCA], [https://pdbe.org/1s4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s4m RCSB], [https://www.ebi.ac.uk/pdbsum/1s4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s4m ProSAT], [https://www.topsan.org/Proteins/BSGC/1s4m TOPSAN]</span></td></tr>
|RELATEDENTRY=[[1mrz|1MRZ]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1s4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s4m OCA], [http://www.ebi.ac.uk/pdbsum/1s4m PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1s4m RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q9WZW1_THEMA Q9WZW1_THEMA]
 
== Evolutionary Conservation ==
'''Crystal structure of flavin binding to FAD synthetase from Thermotoga maritina'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/s4/1s4m_consurf.spt"</scriptWhenChecked>
1S4M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S4M OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==Reference==
  </jmolCheckbox>
Crystal structure of flavin binding to FAD synthetase of Thermotoga maritima., Wang W, Kim R, Yokota H, Kim SH, Proteins. 2005 Jan 1;58(1):246-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15468322 15468322]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s4m ConSurf].
[[Category: Single protein]]
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: BSGC, Berkeley Structural Genomics Center.]]
[[Category: Kim R]]
[[Category: Kim, R.]]
[[Category: Kim S-H]]
[[Category: Kim, S H.]]
[[Category: Wang W]]
[[Category: Wang, W.]]
[[Category: Yokota H]]
[[Category: Yokota, H.]]
[[Category: berkeley structural genomics center]]
[[Category: bsgc structure funded by nih]]
[[Category: fad]]
[[Category: flavin]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: riboflavin kinase]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:37:19 2008''

Latest revision as of 11:28, 14 February 2024

Crystal structure of flavin binding to FAD synthetase from Thermotoga maritinaCrystal structure of flavin binding to FAD synthetase from Thermotoga maritina

Structural highlights

1s4m is a 2 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9WZW1_THEMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1s4m, resolution 2.10Å

Drag the structure with the mouse to rotate

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OCA
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