1s4m: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1s4m.jpg|left|200px]]
- {{Structure
+==Crystal structure of flavin binding to FAD synthetase from Thermotoga maritina==
-|PDB= 1s4m |SIZE=350|CAPTION= <scene name='initialview01'>1s4m</scene>, resolution 2.1&Aring;
+<StructureSection load='1s4m' size='340' side='right'caption='[[1s4m]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> and <scene name='pdbligand=LUM:LUMICHROME'>LUM</scene>
+<table><tr><td colspan='2'>[[1s4m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S4M FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-|GENE=
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LUM:LUMICHROME'>LUM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-}}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s4m OCA], [https://pdbe.org/1s4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s4m RCSB], [https://www.ebi.ac.uk/pdbsum/1s4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s4m ProSAT], [https://www.topsan.org/Proteins/BSGC/1s4m TOPSAN]</span></td></tr>
+</table>
-'''Crystal structure of flavin binding to FAD synthetase from Thermotoga maritina'''
+== Function ==
+[https://www.uniprot.org/uniprot/Q9WZW1_THEMA Q9WZW1_THEMA]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-S4M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S4M OCA].
+Check<jmol>
+  <jmolCheckbox>
-==Reference==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/s4/1s4m_consurf.spt"</scriptWhenChecked>
-Crystal structure of flavin binding to FAD synthetase of Thermotoga maritima., Wang W, Kim R, Yokota H, Kim SH, Proteins. 2005 Jan 1;58(1):246-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15468322 15468322]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Single protein]]
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s4m ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermotoga maritima]]
-[[Category: BSGC, Berkeley Structural Genomics Center.]]
+[[Category: Kim R]]
-[[Category: Kim, R.]]
+[[Category: Kim S-H]]
-[[Category: Kim, S H.]]
+[[Category: Wang W]]
-[[Category: Wang, W.]]
+[[Category: Yokota H]]
-[[Category: Yokota, H.]]
-[[Category: LUM]]
-[[Category: MG]]
-[[Category: berkeley structural genomics center]]
-[[Category: bsgc structure funded by nih]]
-[[Category: fad]]
-[[Category: flavin]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-[[Category: riboflavin kinase]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:00:23 2008''