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==Structural Genomics, a Flavoprotein NrdI from Bacillus subtilis==
==Structural Genomics, a Flavoprotein NrdI from Bacillus subtilis==
<StructureSection load='1rlj' size='340' side='right' caption='[[1rlj]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='1rlj' size='340' side='right'caption='[[1rlj]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1rlj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RLJ FirstGlance]. <br>
<table><tr><td colspan='2'>[[1rlj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RLJ FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NRDI, BSU17370 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rlj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rlj OCA], [http://pdbe.org/1rlj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1rlj RCSB], [http://www.ebi.ac.uk/pdbsum/1rlj PDBsum], [http://www.topsan.org/Proteins/MCSG/1rlj TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rlj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rlj OCA], [https://pdbe.org/1rlj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rlj RCSB], [https://www.ebi.ac.uk/pdbsum/1rlj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rlj ProSAT], [https://www.topsan.org/Proteins/MCSG/1rlj TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/NRDI_BACSU NRDI_BACSU]] Probably involved in ribonucleotide reductase function.  
[https://www.uniprot.org/uniprot/NRDI_BACSU NRDI_BACSU] Probably involved in ribonucleotide reductase function.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rl/1rlj_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rl/1rlj_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus globigii migula 1900]]
[[Category: Bacillus subtilis]]
[[Category: Collart, F]]
[[Category: Large Structures]]
[[Category: Joachimiak, A]]
[[Category: Collart F]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Wu, R]]
[[Category: Wu R]]
[[Category: Zhang, R]]
[[Category: Zhang R]]
[[Category: Alpha/beta/alpha sandwich]]
[[Category: Flavoprotein]]
[[Category: Fmn]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Thioredoxin]]
[[Category: Unknown function]]

Latest revision as of 11:24, 14 February 2024

Structural Genomics, a Flavoprotein NrdI from Bacillus subtilisStructural Genomics, a Flavoprotein NrdI from Bacillus subtilis

Structural highlights

1rlj is a 1 chain structure with sequence from Bacillus subtilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

NRDI_BACSU Probably involved in ribonucleotide reductase function.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1rlj, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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