1ril: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1ril.png|left|200px]]
-{{STRUCTURE_1ril|  PDB=1ril  |  SCENE=  }}
+==CRYSTAL STRUCTURE OF RIBONUCLEASE H FROM THERMUS THERMOPHILUS HB8 REFINED AT 2.8 ANGSTROMS RESOLUTION==
+<StructureSection load='1ril' size='340' side='right'caption='[[1ril]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-===CRYSTAL STRUCTURE OF RIBONUCLEASE H FROM THERMUS THERMOPHILUS HB8 REFINED AT 2.8 ANGSTROMS RESOLUTION===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1ril]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RIL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RIL FirstGlance]. <br>
-{{ABSTRACT_PUBMED_8385228}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ril FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ril OCA], [https://pdbe.org/1ril PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ril RCSB], [https://www.ebi.ac.uk/pdbsum/1ril PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ril ProSAT]</span></td></tr>
-==About this Structure==
+</table>
-[[1ril]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RIL OCA].
+== Function ==
+[https://www.uniprot.org/uniprot/RNH_THET8 RNH_THET8] Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ri/1ril_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ril ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Ribonuclease|Ribonuclease]]
+*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:008385228</ref><ref group="xtra">PMID:009730837</ref><references group="xtra"/>
+[[Category: Large Structures]]
-[[Category: Ribonuclease H]]
 [[Category: Thermus thermophilus]]
-[[Category: Ishikawa, K.]]
+[[Category: Ishikawa K]]
-[[Category: Kanaya, S.]]
+[[Category: Kanaya S]]
-[[Category: Katayanagi, K.]]
+[[Category: Katayanagi K]]
-[[Category: Kimura, S.]]
+[[Category: Kimura S]]
-[[Category: Morikawa, K.]]
+[[Category: Morikawa K]]
-[[Category: Nakamura, H.]]
+[[Category: Nakamura H]]
-[[Category: Okumura, M.]]
+[[Category: Okumura M]]