1rhc: Difference between revisions

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-{{Seed}}
-[[Image:1rhc.png|left|200px]]
-<!--
+==F420-dependent secondary alcohol dehydrogenase in complex with an F420-acetone adduct==
-The line below this paragraph, containing "STRUCTURE_1rhc", creates the "Structure Box" on the page.
+<StructureSection load='1rhc' size='340' side='right'caption='[[1rhc]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1rhc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanoculleus_thermophilus Methanoculleus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RHC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RHC FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACN:ACETONE'>ACN</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=F42:COENZYME+F420'>F42</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
-{{STRUCTURE_1rhc|  PDB=1rhc  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rhc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rhc OCA], [https://pdbe.org/1rhc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rhc RCSB], [https://www.ebi.ac.uk/pdbsum/1rhc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rhc ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/O93734_9EURY O93734_9EURY]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rh/1rhc_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rhc ConSurf].
+<div style="clear:both"></div>
-===F420-dependent secondary alcohol dehydrogenase in complex with an F420-acetone adduct===
+==See Also==
+*[[Alcohol dehydrogenase 3D structures|Alcohol dehydrogenase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_15016352}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 15016352 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_15016352}}
-==About this Structure==
-RHC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanoculleus_thermophilus Methanoculleus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RHC OCA].
-==Reference==
-Coenzyme binding in F420-dependent secondary alcohol dehydrogenase, a member of the bacterial luciferase family., Aufhammer SW, Warkentin E, Berk H, Shima S, Thauer RK, Ermler U, Structure. 2004 Mar;12(3):361-70. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15016352 15016352]
 [[Category: Methanoculleus thermophilus]]
-[[Category: Single protein]]
+[[Category: Aufhammer SW]]
-[[Category: Aufhammer, S W.]]
+[[Category: Berk H]]
-[[Category: Berk, H.]]
+[[Category: Ermler U]]
-[[Category: Ermler, U.]]
+[[Category: Shima S]]
-[[Category: Shima, S.]]
+[[Category: Thauer RK]]
-[[Category: Thauer, R K.]]
+[[Category: Warkentin E]]
-[[Category: Warkentin, E.]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 03:44:08 2008''