1rf5: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:1rf5.png|left|200px]]
-<!--
+==Structural Studies of Streptococcus pneumoniae EPSP Synthase in Unliganded State==
-The line below this paragraph, containing "STRUCTURE_1rf5", creates the "Structure Box" on the page.
+<StructureSection load='1rf5' size='340' side='right'caption='[[1rf5]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1rf5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RF5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RF5 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rf5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rf5 OCA], [https://pdbe.org/1rf5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rf5 RCSB], [https://www.ebi.ac.uk/pdbsum/1rf5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rf5 ProSAT]</span></td></tr>
-{{STRUCTURE_1rf5|  PDB=1rf5  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/AROA_STRPN AROA_STRPN]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rf/1rf5_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rf5 ConSurf].
+<div style="clear:both"></div>
-===Structural Studies of Streptococcus pneumoniae EPSP Synthase in Unliganded State===
+==See Also==
+*[[EPSP synthase 3D structures|EPSP synthase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_14763973}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 14763973 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_14763973}}
-==About this Structure==
-RF5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RF5 OCA].
-==Reference==
-Structural studies of Streptococcus pneumoniae EPSP synthase in unliganded state, tetrahedral intermediate-bound state and S3P-GLP-bound state., Park H, Hilsenbeck JL, Kim HJ, Shuttleworth WA, Park YH, Evans JN, Kang C, Mol Microbiol. 2004 Feb;51(4):963-71. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14763973 14763973]
-[[Category: 3-phosphoshikimate 1-carboxyvinyltransferase]]
-[[Category: Single protein]]
 [[Category: Streptococcus pneumoniae]]
-[[Category: Evans, J N.]]
+[[Category: Evans JN]]
-[[Category: Hilsenbeck, J L.]]
+[[Category: Hilsenbeck JL]]
-[[Category: Kang, C.]]
+[[Category: Kang C]]
-[[Category: Kim, H J.]]
+[[Category: Kim HJ]]
-[[Category: Park, H.]]
+[[Category: Park H]]
-[[Category: Park, Y H.]]
+[[Category: Park YH]]
-[[Category: Shuttleworth, W A.]]
+[[Category: Shuttleworth WA]]
-[[Category: Epsp synthase]]
-[[Category: Glyphosate]]
-[[Category: Pep]]
-[[Category: S. pneumoniae]]
-[[Category: S3p]]
-[[Category: Shikimate pathway]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 19:46:54 2008''