1q2v: Difference between revisions
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==Crystal structure of the chaperonin from Thermococcus strain KS-1 (nucleotide-free form)== | |||
<StructureSection load='1q2v' size='340' side='right'caption='[[1q2v]], [[Resolution|resolution]] 2.40Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1q2v]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_sp._JCM_11816 Thermococcus sp. JCM 11816]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q2V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q2V FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
== | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q2v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q2v OCA], [https://pdbe.org/1q2v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q2v RCSB], [https://www.ebi.ac.uk/pdbsum/1q2v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q2v ProSAT]</span></td></tr> | ||
[[1q2v]] is a 4 chain structure | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/THSA_THEK1 THSA_THEK1] Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q2/1q2v_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q2v ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[Chaperonin|Chaperonin]] | *[[Chaperonin 3D structures|Chaperonin 3D structures]] | ||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: | [[Category: Thermococcus sp. JCM 11816]] | ||
[[Category: Thermococcus sp.]] | [[Category: Iizuka R]] | ||
[[Category: Iizuka | [[Category: Maruyama T]] | ||
[[Category: Maruyama | [[Category: Miki K]] | ||
[[Category: Miki | [[Category: Shomura Y]] | ||
[[Category: Shomura | [[Category: Yohda M]] | ||
[[Category: Yohda | [[Category: Yoshida T]] | ||
[[Category: Yoshida | |||
Latest revision as of 11:12, 14 February 2024
Crystal structure of the chaperonin from Thermococcus strain KS-1 (nucleotide-free form)Crystal structure of the chaperonin from Thermococcus strain KS-1 (nucleotide-free form)
Structural highlights
FunctionTHSA_THEK1 Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity. Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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