1q1e: Difference between revisions

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-{{Seed}}
-[[Image:1q1e.png|left|200px]]
-<!--
+==The ATPase component of E. coli maltose transporter (MalK) in the nucleotide-free form==
-The line below this paragraph, containing "STRUCTURE_1q1e", creates the "Structure Box" on the page.
+<StructureSection load='1q1e' size='340' side='right'caption='[[1q1e]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1q1e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q1E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q1E FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q1e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q1e OCA], [https://pdbe.org/1q1e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q1e RCSB], [https://www.ebi.ac.uk/pdbsum/1q1e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q1e ProSAT]</span></td></tr>
-{{STRUCTURE_1q1e|  PDB=1q1e  |  SCENE=  }}
+</table>
+== Function ==
-===The ATPase component of E. coli maltose transporter (MalK) in the nucleotide-free form===
+[https://www.uniprot.org/uniprot/MALK_ECOLI MALK_ECOLI] Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-<!--
+Check<jmol>
-The line below this paragraph, {{ABSTRACT_PUBMED_14527411}}, adds the Publication Abstract to the page
+  <jmolCheckbox>
-(as it appears on PubMed at http://www.pubmed.gov), where 14527411 is the PubMed ID number.
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q1/1q1e_consurf.spt"</scriptWhenChecked>
--->
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-{{ABSTRACT_PUBMED_14527411}}
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
-==About this Structure==
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q1e ConSurf].
-Q1E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q1E OCA].
+<div style="clear:both"></div>
+__TOC__
-==Reference==
+</StructureSection>
-A tweezers-like motion of the ATP-binding cassette dimer in an ABC transport cycle., Chen J, Lu G, Lin J, Davidson AL, Quiocho FA, Mol Cell. 2003 Sep;12(3):651-61. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14527411 14527411]
+[[Category: Escherichia coli K-12]]
-[[Category: Escherichia coli]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Chen J]]
-[[Category: Chen, J.]]
+[[Category: Davidson AL]]
-[[Category: Davidson, A L.]]
+[[Category: Lin J]]
-[[Category: Lin, J.]]
+[[Category: Lu G]]
-[[Category: Lu, G.]]
+[[Category: Quiocho FA]]
-[[Category: Quiocho, F A.]]
-[[Category: Atp-binding cassette]]
-[[Category: Nucleotide-free form]]
-[[Category: Sugar transport]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 17:45:15 2008''