1pv1: Difference between revisions

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[[Image:1pv1.png|left|200px]]


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==Crystal Structure Analysis of Yeast Hypothetical Protein: YJG8_YEAST==
The line below this paragraph, containing "STRUCTURE_1pv1", creates the "Structure Box" on the page.
<StructureSection load='1pv1' size='340' side='right'caption='[[1pv1]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1pv1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PV1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PV1 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pv1 OCA], [https://pdbe.org/1pv1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pv1 RCSB], [https://www.ebi.ac.uk/pdbsum/1pv1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pv1 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1pv1 TOPSAN]</span></td></tr>
{{STRUCTURE_1pv1|  PDB=1pv1  |  SCENE=  }}
</table>
 
== Function ==
===Crystal Structure Analysis of Yeast Hypothetical Protein: YJG8_YEAST===
[https://www.uniprot.org/uniprot/SFGH_YEAST SFGH_YEAST] Serine hydrolase involved in the detoxification of formaldehyde.
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_18707125}}, adds the Publication Abstract to the page
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pv/1pv1_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_18707125}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
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==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pv1 ConSurf].
1PV1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PV1 OCA].  
<div style="clear:both"></div>
 
__TOC__
==Reference==
</StructureSection>
Structural characterization and reversal of the natural organophosphate resistance of a D-type esterase, Saccharomyces cerevisiae S-formylglutathione hydrolase., Legler PM, Kumaran D, Swaminathan S, Studier FW, Millard CB, Biochemistry. 2008 Sep 9;47(36):9592-601. Epub 2008 Aug 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18707125 18707125]
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Single protein]]
[[Category: Burley SK]]
[[Category: Burley, S K.]]
[[Category: Eswaramoorthy S]]
[[Category: Eswaramoorthy, S.]]
[[Category: Kumaran D]]
[[Category: Kumaran, D.]]
[[Category: Millard C]]
[[Category: Millard, C.]]
[[Category: Swaminathan S]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Swaminathan, S.]]
[[Category: Esterase]]
[[Category: Hydrolase]]
[[Category: Hypothetical]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 12 20:31:49 2008''

Latest revision as of 11:11, 14 February 2024

Crystal Structure Analysis of Yeast Hypothetical Protein: YJG8_YEASTCrystal Structure Analysis of Yeast Hypothetical Protein: YJG8_YEAST

Structural highlights

1pv1 is a 4 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

SFGH_YEAST Serine hydrolase involved in the detoxification of formaldehyde.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1pv1, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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