1ps0: Difference between revisions

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-{{Seed}}
-[[Image:1ps0.png|left|200px]]
-<!--
+==Crystal Structure of the NADP(H)-Dependent Cinnamyl Alcohol Dehydrogenase from Saccharomyces cerevisiae==
-The line below this paragraph, containing "STRUCTURE_1ps0", creates the "Structure Box" on the page.
+<StructureSection load='1ps0' size='340' side='right'caption='[[1ps0]], [[Resolution|resolution]] 3.01&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1ps0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PS0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PS0 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.01&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-{{STRUCTURE_1ps0|  PDB=1ps0  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ps0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ps0 OCA], [https://pdbe.org/1ps0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ps0 RCSB], [https://www.ebi.ac.uk/pdbsum/1ps0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ps0 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/ADH6_YEAST ADH6_YEAST] NADP-dependent alcohol dehydrogenase with a broad substrate specificity.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ps/1ps0_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ps0 ConSurf].
+<div style="clear:both"></div>
-===Crystal Structure of the NADP(H)-Dependent Cinnamyl Alcohol Dehydrogenase from Saccharomyces cerevisiae===
+==See Also==
+*[[Alcohol dehydrogenase 3D structures|Alcohol dehydrogenase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_15289102}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 15289102 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_15289102}}
-==About this Structure==
-PS0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PS0 OCA].
-==Reference==
-Apo and Holo structures of an NADPH-dependent cinnamyl alcohol dehydrogenase from Saccharomyces cerevisiae., Valencia E, Larroy C, Ochoa WF, Pares X, Fita I, Biosca JA, J Mol Biol. 2004 Aug 20;341(4):1049-62. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15289102 15289102]
 [[Category: Saccharomyces cerevisiae]]
-[[Category: Single protein]]
+[[Category: Biosca JA]]
-[[Category: Biosca, J A.]]
+[[Category: Fita I]]
-[[Category: Fita, I.]]
+[[Category: Larroy C]]
-[[Category: Larroy, C.]]
+[[Category: Ochoa WF]]
-[[Category: Ochoa, W F.]]
+[[Category: Pares X]]
-[[Category: Pares, X.]]
+[[Category: Valencia E]]
-[[Category: Valencia, E.]]
-[[Category: Adh topology]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 16:22:53 2008''