1pdf: Difference between revisions
Jump to navigation
Jump to search
m Protected "1pdf" [edit=sysop:move=sysop] |
No edit summary |
||
| (8 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
==Fitting of gp11 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 baseplate-tail tube complex== | |||
<SX load='1pdf' size='340' side='right' viewer='molstar' caption='[[1pdf]], [[Resolution|resolution]] 12.00Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1pdf]] is a 18 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PDF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PDF FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 12Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pdf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pdf OCA], [https://pdbe.org/1pdf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pdf RCSB], [https://www.ebi.ac.uk/pdbsum/1pdf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pdf ProSAT]</span></td></tr> | |||
== | </table> | ||
[[1pdf]] is a 18 chain structure with sequence from [ | == Function == | ||
[https://www.uniprot.org/uniprot/BP11_BPT4 BP11_BPT4] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:15315755). Involved in the tail assembly.<ref>PMID:15315755</ref> <ref>PMID:21129200</ref> | |||
== | == Evolutionary Conservation == | ||
< | [[Image:Consurf_key_small.gif|200px|right]] | ||
[[Category: | Check<jmol> | ||
[[Category: Arisaka | <jmolCheckbox> | ||
[[Category: Chipman | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pd/1pdf_consurf.spt"</scriptWhenChecked> | ||
[[Category: Kanamaru | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
[[Category: Kostyuchenko | <text>to colour the structure by Evolutionary Conservation</text> | ||
[[Category: Leiman | </jmolCheckbox> | ||
[[Category: Mesyanzhinov | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pdf ConSurf]. | ||
<div style="clear:both"></div> | |||
[[Category: Rossmann | == References == | ||
[[Category: | <references/> | ||
__TOC__ | |||
</SX> | |||
[[Category: Escherichia virus T4]] | |||
[[Category: Large Structures]] | |||
[[Category: Arisaka F]] | |||
[[Category: Chipman PR]] | |||
[[Category: Kanamaru S]] | |||
[[Category: Kostyuchenko VA]] | |||
[[Category: Leiman PG]] | |||
[[Category: Mesyanzhinov VV]] | |||
[[Category: Rossmann MG]] | |||
[[Category: Van Raaij MJ]] | |||
Latest revision as of 11:07, 14 February 2024
Fitting of gp11 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 baseplate-tail tube complexFitting of gp11 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 baseplate-tail tube complex
| |||||||||
