1pc5: Difference between revisions

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[[Image:1pc5.png|left|200px]]


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==Crystal Structure of the P50G Mutant of Ferredoxin I at 1.8 A Resolution==
The line below this paragraph, containing "STRUCTURE_1pc5", creates the "Structure Box" on the page.
<StructureSection load='1pc5' size='340' side='right'caption='[[1pc5]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1pc5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PC5 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
{{STRUCTURE_1pc5|  PDB=1pc5 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pc5 OCA], [https://pdbe.org/1pc5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pc5 RCSB], [https://www.ebi.ac.uk/pdbsum/1pc5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pc5 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/FER1_AZOVI FER1_AZOVI] Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/1pc5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pc5 ConSurf].
<div style="clear:both"></div>


===Crystal Structure of the P50G Mutant of Ferredoxin I at 1.8 A Resolution===
==See Also==
 
*[[Ferredoxin 3D structures|Ferredoxin 3D structures]]
 
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{{ABSTRACT_PUBMED_12962482}}
 
==About this Structure==
1PC5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PC5 OCA].
 
==Reference==
Mechanisms of redox-coupled proton transfer in proteins: role of the proximal proline in reactions of the [3Fe-4S] cluster in Azotobacter vinelandii ferredoxin I., Camba R, Jung YS, Hunsicker-Wang LM, Burgess BK, Stout CD, Hirst J, Armstrong FA, Biochemistry. 2003 Sep 16;42(36):10589-99. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12962482 12962482]
[[Category: Azotobacter vinelandii]]
[[Category: Azotobacter vinelandii]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
[[Category: Armstrong FA]]
[[Category: Electron transport]]
[[Category: Burgess BK]]
[[Category: Ferredoxin]]
[[Category: Camba R]]
[[Category: Iron-sulfur protein]]
[[Category: Chen K]]
[[Category: Mutant]]
[[Category: Hirst J]]
 
[[Category: Hunsicker-Wang LM]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 20:18:11 2009''
[[Category: Jung YS]]
[[Category: Stout CD]]

Latest revision as of 11:06, 14 February 2024

Crystal Structure of the P50G Mutant of Ferredoxin I at 1.8 A ResolutionCrystal Structure of the P50G Mutant of Ferredoxin I at 1.8 A Resolution

Structural highlights

1pc5 is a 1 chain structure with sequence from Azotobacter vinelandii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

FER1_AZOVI Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1pc5, resolution 1.80Å

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