1nz4: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1nz4.png|left|200px]]
-<!--
+==The horse heart myoglobin variant K45E/K63E complexed with Cadmium==
-The line below this paragraph, containing "STRUCTURE_1nz4", creates the "Structure Box" on the page.
+<StructureSection load='1nz4' size='340' side='right'caption='[[1nz4]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1nz4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NZ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NZ4 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-{{STRUCTURE_1nz4|  PDB=1nz4  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nz4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nz4 OCA], [https://pdbe.org/1nz4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nz4 RCSB], [https://www.ebi.ac.uk/pdbsum/1nz4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nz4 ProSAT]</span></td></tr>
+</table>
-===The horse heart myoglobin variant K45E/K63E complexed with Cadmium===
+== Function ==
+[https://www.uniprot.org/uniprot/MYG_HORSE MYG_HORSE] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_12644706}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 12644706 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nz/1nz4_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_12644706}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-[[1nz4]] is a 1 chain structure of [[Myoglobin]] with sequence from [http://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NZ4 OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nz4 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Myoglobin]]
+*[[Myoglobin 3D structures|Myoglobin 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:12644706</ref><references group="xtra"/>
 [[Category: Equus caballus]]
-[[Category: Brayer, G D.]]
+[[Category: Large Structures]]
-[[Category: Hunter, C L.]]
+[[Category: Brayer GD]]
-[[Category: Lee, H.]]
+[[Category: Hunter CL]]
-[[Category: Mauk, A G.]]
+[[Category: Lee H]]
-[[Category: Mauk, M R.]]
+[[Category: Mauk AG]]
-[[Category: Maurus, R.]]
+[[Category: Mauk MR]]
-[[Category: Nguyen, N.]]
+[[Category: Maurus R]]
-[[Category: Raven, E L.]]
+[[Category: Nguyen N]]
-[[Category: Smith, S.]]
+[[Category: Raven EL]]
-[[Category: Tong, H.]]
+[[Category: Smith S]]
-[[Category: Cadmium cd2+ horse heart myoglobin engineered metal binding site]]
+[[Category: Tong H]]
-[[Category: Oxygen storage/transport complex]]