1nqt: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:1nqt.png|left|200px]]
-<!--
+==Crystal structure of bovine Glutamate dehydrogenase-ADP complex==
-The line below this paragraph, containing "STRUCTURE_1nqt", creates the "Structure Box" on the page.
+<StructureSection load='1nqt' size='340' side='right'caption='[[1nqt]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1nqt]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NQT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NQT FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
-{{STRUCTURE_1nqt|  PDB=1nqt  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nqt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nqt OCA], [https://pdbe.org/1nqt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nqt RCSB], [https://www.ebi.ac.uk/pdbsum/1nqt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nqt ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/DHE3_BOVIN DHE3_BOVIN] May be involved in learning and memory reactions by increasing the turnover of the excitatory neurotransmitter glutamate (By similarity).<ref>PMID:14659072</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nq/1nqt_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nqt ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of bovine Glutamate dehydrogenase-ADP complex===
+==See Also==
+*[[Glutamate dehydrogenase 3D structures|Glutamate dehydrogenase 3D structures]]
+== References ==
-<!--
+<references/>
-The line below this paragraph, {{ABSTRACT_PUBMED_12653548}}, adds the Publication Abstract to the page
+__TOC__
-(as it appears on PubMed at http://www.pubmed.gov), where 12653548 is the PubMed ID number.
+</StructureSection>
--->
-{{ABSTRACT_PUBMED_12653548}}
-==About this Structure==
-NQT is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NQT OCA].
-==Reference==
-Structural studies on ADP activation of mammalian glutamate dehydrogenase and the evolution of regulation., Banerjee S, Schmidt T, Fang J, Stanley CA, Smith TJ, Biochemistry. 2003 Apr 1;42(12):3446-56. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12653548 12653548]
 [[Category: Bos taurus]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Banerjee, S.]]
+[[Category: Banerjee S]]
-[[Category: Fang, J.]]
+[[Category: Fang J]]
-[[Category: Schmidt, T.]]
+[[Category: Schmidt T]]
-[[Category: Smith, T J.]]
+[[Category: Smith TJ]]
-[[Category: Stanley, C A.]]
+[[Category: Stanley CA]]
-[[Category: Dimer of two hexamer]]
-[[Category: Glutamate dehydrogenase-adp complex]]
-[[Category: Regulation]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 14:39:18 2008''