1nnh: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:1nnh.png|left|200px]]
-<!--
+==Hypothetical protein from Pyrococcus furiosus Pfu-1801964==
-The line below this paragraph, containing "STRUCTURE_1nnh", creates the "Structure Box" on the page.
+<StructureSection load='1nnh' size='340' side='right'caption='[[1nnh]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1nnh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NNH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NNH FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-{{STRUCTURE_1nnh|  PDB=1nnh  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nnh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nnh OCA], [https://pdbe.org/1nnh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nnh RCSB], [https://www.ebi.ac.uk/pdbsum/1nnh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nnh ProSAT], [https://www.topsan.org/Proteins/SECSG/1nnh TOPSAN]</span></td></tr>
+</table>
-===Hypothetical protein from Pyrococcus furiosus Pfu-1801964===
+== Function ==
+[https://www.uniprot.org/uniprot/Q8TZN6_PYRFU Q8TZN6_PYRFU]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-NNH is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NNH OCA].
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nn/1nnh_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nnh ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Pyrococcus furiosus]]
-[[Category: III, W B.Arendall.]]
+[[Category: Arendall III WB]]
-[[Category: Liu, Z J.]]
+[[Category: Liu Z-J]]
-[[Category: Richardson, D C.]]
+[[Category: Richardson DC]]
-[[Category: Richardson, J S.]]
+[[Category: Richardson JS]]
-[[Category: Rose, J P.]]
+[[Category: Rose JP]]
-[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+[[Category: Schubot FD]]
-[[Category: Schubot, F D.]]
+[[Category: Shah A]]
-[[Category: Shah, A.]]
+[[Category: Tempel W]]
-[[Category: Tempel, W.]]
+[[Category: Wang B-C]]
-[[Category: Wang, B C.]]
-[[Category: Asparaginyl-trna synthetase]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Pyrococcus furiosus]]
-[[Category: Secsg]]
-[[Category: Southeast collaboratory for structural genomic]]
-[[Category: Structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:40:06 2008''