1n7y: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1n7y.png|left|200px]]
-<!--
+==STREPTAVIDIN MUTANT N23E AT 1.96A==
-The line below this paragraph, containing "STRUCTURE_1n7y", creates the "Structure Box" on the page.
+<StructureSection load='1n7y' size='340' side='right'caption='[[1n7y]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1n7y]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N7Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N7Y FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n7y OCA], [https://pdbe.org/1n7y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n7y RCSB], [https://www.ebi.ac.uk/pdbsum/1n7y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n7y ProSAT]</span></td></tr>
-{{STRUCTURE_1n7y|  PDB=1n7y  |  SCENE=  }}
+</table>
+== Function ==
-===STREPTAVIDIN MUTANT N23E AT 1.96A===
+[https://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-<!--
+Check<jmol>
-The line below this paragraph, {{ABSTRACT_PUBMED_12925786}}, adds the Publication Abstract to the page
+  <jmolCheckbox>
-(as it appears on PubMed at http://www.pubmed.gov), where 12925786 is the PubMed ID number.
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n7/1n7y_consurf.spt"</scriptWhenChecked>
--->
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-{{ABSTRACT_PUBMED_12925786}}
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
-==About this Structure==
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n7y ConSurf].
-[[1n7y]] is a 4 chain structure of [[Avidin]] with sequence from [http://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N7Y OCA].
+<div style="clear:both"></div>
 ==See Also==
-*[[Avidin]]
+*[[Avidin 3D structures|Avidin 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:12925786</ref><references group="xtra"/>
+[[Category: Large Structures]]
 [[Category: Streptomyces avidinii]]
-[[Category: Chu, V.]]
+[[Category: Chu V]]
-[[Category: Freitag, S.]]
+[[Category: Freitag S]]
-[[Category: Klumb, L A.]]
+[[Category: Klumb LA]]
-[[Category: Stayton, P S.]]
+[[Category: Le Trong I]]
-[[Category: Stenkamp, R E.]]
+[[Category: Stayton PS]]
-[[Category: Trong, I Le.]]
+[[Category: Stenkamp RE]]
-[[Category: Biotin-binding protein]]
-[[Category: Homotetramer]]