1n2f: Difference between revisions

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-{{Seed}}
-[[Image:1n2f.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF P. AERUGINOSA OHR==
-The line below this paragraph, containing "STRUCTURE_1n2f", creates the "Structure Box" on the page.
+<StructureSection load='1n2f' size='340' side='right'caption='[[1n2f]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1n2f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N2F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N2F FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTT:2,3-DIHYDROXY-1,4-DITHIOBUTANE'>DTT</scene></td></tr>
-{{STRUCTURE_1n2f|  PDB=1n2f  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n2f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n2f OCA], [https://pdbe.org/1n2f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n2f RCSB], [https://www.ebi.ac.uk/pdbsum/1n2f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n2f ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9HZZ3_PSEAE Q9HZZ3_PSEAE]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n2/1n2f_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n2f ConSurf].
+<div style="clear:both"></div>
-===CRYSTAL STRUCTURE OF P. AERUGINOSA OHR===
+==See Also==
+*[[Organic hydroperoxide resistance protein|Organic hydroperoxide resistance protein]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_12485986}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 12485986 is the PubMed ID number.
+[[Category: Pseudomonas aeruginosa PAO1]]
--->
+[[Category: Barton WA]]
-{{ABSTRACT_PUBMED_12485986}}
+[[Category: Lesniak J]]
+[[Category: Nikolov DB]]
-==About this Structure==
-N2F is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N2F OCA].
-==Reference==
-Structural and functional characterization of the Pseudomonas hydroperoxide resistance protein Ohr., Lesniak J, Barton WA, Nikolov DB, EMBO J. 2002 Dec 16;21(24):6649-59. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12485986 12485986]
-[[Category: Pseudomonas aeruginosa pao1]]
-[[Category: Single protein]]
-[[Category: Barton, W A.]]
-[[Category: Lesniak, J.]]
-[[Category: Nikolov, D B.]]
-[[Category: Peroxide reductase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 06:37:46 2008''