1n1q: Difference between revisions

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-{{Seed}}
-[[Image:1n1q.png|left|200px]]
-<!--
+==Crystal structure of a Dps protein from Bacillus brevis==
-The line below this paragraph, containing "STRUCTURE_1n1q", creates the "Structure Box" on the page.
+<StructureSection load='1n1q' size='340' side='right'caption='[[1n1q]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1n1q]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Brevibacillus_brevis Brevibacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N1Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N1Q FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FEO:MU-OXO-DIIRON'>FEO</scene></td></tr>
-{{STRUCTURE_1n1q|  PDB=1n1q  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n1q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n1q OCA], [https://pdbe.org/1n1q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n1q RCSB], [https://www.ebi.ac.uk/pdbsum/1n1q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n1q ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/DPS_BREBE DPS_BREBE]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n1/1n1q_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n1q ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of a Dps protein from Bacillus brevis===
+==See Also==
+*[[Ferritin 3D structures|Ferritin 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_12767829}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 12767829 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_12767829}}
-==About this Structure==
-N1Q is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Brevibacillus_brevis Brevibacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N1Q OCA].
-==Reference==
-The multi-layered structure of Dps with a novel di-nuclear ferroxidase center., Ren B, Tibbelin G, Kajino T, Asami O, Ladenstein R, J Mol Biol. 2003 Jun 6;329(3):467-77. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12767829 12767829]
 [[Category: Brevibacillus brevis]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Asami, O.]]
+[[Category: Asami O]]
-[[Category: Kajino, T.]]
+[[Category: Kajino T]]
-[[Category: Ladenstein, R.]]
+[[Category: Ladenstein R]]
-[[Category: Ren, B.]]
+[[Category: Ren B]]
-[[Category: Tibbelin, G.]]
+[[Category: Tibbelin G]]
-[[Category: Four-helix bundle]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 12:00:34 2008''