1mqw: Difference between revisions

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-{{Seed}}
-[[Image:1mqw.png|left|200px]]
-<!--
+==Structure of the MT-ADPRase in complex with three Mn2+ ions and AMPCPR, a Nudix enzyme==
-The line below this paragraph, containing "STRUCTURE_1mqw", creates the "Structure Box" on the page.
+<StructureSection load='1mqw' size='340' side='right'caption='[[1mqw]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1mqw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MQW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MQW FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADV:ALPHA-BETA+METHYLENE+ADP-RIBOSE'>ADV</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-{{STRUCTURE_1mqw|  PDB=1mqw  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mqw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mqw OCA], [https://pdbe.org/1mqw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mqw RCSB], [https://www.ebi.ac.uk/pdbsum/1mqw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mqw ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/O33199_MYCTO O33199_MYCTO]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mq/1mqw_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mqw ConSurf].
+<div style="clear:both"></div>
-===Structure of the MT-ADPRase in complex with three Mn2+ ions and AMPCPR, a Nudix enzyme===
+==See Also==
+*[[ADP-ribose pyrophosphatase 3D structures|ADP-ribose pyrophosphatase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_12906832}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 12906832 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_12906832}}
-==About this Structure==
-MQW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MQW OCA].
-==Reference==
-Structure and mechanism of MT-ADPRase, a nudix hydrolase from Mycobacterium tuberculosis., Kang LW, Gabelli SB, Cunningham JE, O'Handley SF, Amzel LM, Structure. 2003 Aug;11(8):1015-23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12906832 12906832]
-[[Category: ADP-ribose diphosphatase]]
 [[Category: Mycobacterium tuberculosis]]
-[[Category: Single protein]]
+[[Category: Amzel LM]]
-[[Category: Amzel, L M.]]
+[[Category: Bianchet MA]]
-[[Category: Bianchet, M A.]]
+[[Category: Cunningham JE]]
-[[Category: Cunningham, J E.]]
+[[Category: Gabelli SB]]
-[[Category: Gabelli, S B.]]
+[[Category: Kang L-W]]
-[[Category: Handley, S F.O.]]
+[[Category: O'Handley SF]]
-[[Category: Kang, L W.]]
-[[Category: Adpr]]
-[[Category: Mycobacterium tuberculosis]]
-[[Category: Nudix hydrolase]]
-[[Category: Rv1700]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 13:24:23 2008''