1mog: Difference between revisions

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[[Image:1mog.png|left|200px]]


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==Crystal structure of H. salinarum dodecin==
The line below this paragraph, containing "STRUCTURE_1mog", creates the "Structure Box" on the page.
<StructureSection load='1mog' size='340' side='right'caption='[[1mog]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1mog]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MOG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MOG FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=RBF:RIBOFLAVIN'>RBF</scene></td></tr>
{{STRUCTURE_1mog|  PDB=1mog  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mog OCA], [https://pdbe.org/1mog PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mog RCSB], [https://www.ebi.ac.uk/pdbsum/1mog PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mog ProSAT]</span></td></tr>
 
</table>
===Crystal structure of H. salinarum dodecin===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9HPW4_HALSA Q9HPW4_HALSA]
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mo/1mog_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_12679016}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1MOG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MOG OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mog ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Crystal structure of halophilic dodecin: a novel, dodecameric flavin binding protein from Halobacterium salinarum., Bieger B, Essen LO, Oesterhelt D, Structure. 2003 Apr;11(4):375-85. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12679016 12679016]
</StructureSection>
[[Category: Halobacterium salinarum]]
[[Category: Halobacterium salinarum]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Bieger, B.]]
[[Category: Bieger B]]
[[Category: Essen, L O.]]
[[Category: Essen L-O]]
[[Category: Oesterhelt, D.]]
[[Category: Oesterhelt D]]
[[Category: 23-symmetric dodecamer]]
[[Category: Binding site for dimerized riboflavin]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul  3 00:33:58 2008''

Latest revision as of 10:46, 14 February 2024

Crystal structure of H. salinarum dodecinCrystal structure of H. salinarum dodecin

Structural highlights

1mog is a 1 chain structure with sequence from Halobacterium salinarum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q9HPW4_HALSA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1mog, resolution 1.70Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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