1ma7: Difference between revisions

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-[[Image:1ma7.png|left|200px]]
-<!--
+==Crystal structure of Cre site-specific recombinase complexed with a mutant DNA substrate, LoxP-A8/T27==
-The line below this paragraph, containing "STRUCTURE_1ma7", creates the "Structure Box" on the page.
+<StructureSection load='1ma7' size='340' side='right'caption='[[1ma7]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1ma7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_P1 Escherichia virus P1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MA7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MA7 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ma7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ma7 OCA], [https://pdbe.org/1ma7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ma7 RCSB], [https://www.ebi.ac.uk/pdbsum/1ma7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ma7 ProSAT]</span></td></tr>
-{{STRUCTURE_1ma7|  PDB=1ma7  |  SCENE=  }}
+</table>
+== Function ==
-===Crystal structure of Cre site-specific recombinase complexed with a mutant DNA substrate, LoxP-A8/T27===
+[https://www.uniprot.org/uniprot/RECR_BPP1 RECR_BPP1] Catalyzes site-specific recombination between two 34-base-pair LOXP sites. Its role is to maintain the phage genome as a monomeric unit-copy plasmid in the lysogenic state.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-<!--
+Check<jmol>
-The line below this paragraph, {{ABSTRACT_PUBMED_12779336}}, adds the Publication Abstract to the page
+  <jmolCheckbox>
-(as it appears on PubMed at http://www.pubmed.gov), where 12779336 is the PubMed ID number.
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ma/1ma7_consurf.spt"</scriptWhenChecked>
--->
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-{{ABSTRACT_PUBMED_12779336}}
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
-==About this Structure==
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ma7 ConSurf].
-[[1ma7]] is a 4 chain structure of [[Resolvase]] with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p1 Enterobacteria phage p1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MA7 OCA].
+<div style="clear:both"></div>
 ==See Also==
-*[[Resolvase]]
+*[[Resolvase 3D structures|Resolvase 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:12779336</ref><references group="xtra"/>
+[[Category: Escherichia virus P1]]
-[[Category: Enterobacteria phage p1]]
+[[Category: Large Structures]]
-[[Category: Baldwin, E P.]]
+[[Category: Baldwin EP]]
-[[Category: Chu, V C.]]
+[[Category: Chu VC]]
-[[Category: Martin, S S.]]
+[[Category: Martin SS]]
-[[Category: Cre-lox site-specific recombination]]
-[[Category: Hydrolase]]
-[[Category: Ligase/dna complex]]
-[[Category: Protein-dna complex]]
-[[Category: Specificity of protein-dna interaction]]
-[[Category: Tyrosine recombinase]]