1m7s: Difference between revisions

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[[Image:1m7s.png|left|200px]]


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==Crystal Structure Analysis of Catalase CatF of Pseudomonas syringae==
The line below this paragraph, containing "STRUCTURE_1m7s", creates the "Structure Box" on the page.
<StructureSection load='1m7s' size='340' side='right'caption='[[1m7s]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1m7s]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae Pseudomonas syringae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M7S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M7S FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
{{STRUCTURE_1m7s| PDB=1m7s |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m7s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m7s OCA], [https://pdbe.org/1m7s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m7s RCSB], [https://www.ebi.ac.uk/pdbsum/1m7s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m7s ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CATB_PSESY CATB_PSESY] Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m7/1m7s_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m7s ConSurf].
<div style="clear:both"></div>


===Crystal Structure Analysis of Catalase CatF of Pseudomonas syringae===
==See Also==
 
*[[Catalase 3D structures|Catalase 3D structures]]
 
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[[Category: Large Structures]]
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{{ABSTRACT_PUBMED_12557185}}
 
==About this Structure==
1M7S is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae Pseudomonas syringae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M7S OCA].
 
==Reference==
Structure of the Clade 1 catalase, CatF of Pseudomonas syringae, at 1.8 A resolution., Carpena X, Soriano M, Klotz MG, Duckworth HW, Donald LJ, Melik-Adamyan W, Fita I, Loewen PC, Proteins. 2003 Feb 15;50(3):423-36. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12557185 12557185]
[[Category: Catalase]]
[[Category: Pseudomonas syringae]]
[[Category: Pseudomonas syringae]]
[[Category: Single protein]]
[[Category: Carpena X]]
[[Category: Carpena, X.]]
[[Category: Donald LJ]]
[[Category: Donald, L J.]]
[[Category: Duckworth HW]]
[[Category: Duckworth, H W.]]
[[Category: Fita I]]
[[Category: Fita, I.]]
[[Category: Klotz MG]]
[[Category: Klotz, M G.]]
[[Category: Loewen PC]]
[[Category: Loewen, P C.]]
[[Category: Melik-Adamyan W]]
[[Category: Melik-Adamyan, W.]]
[[Category: Soriano M]]
[[Category: Soriano, M.]]
[[Category: Alpha helical domain]]
[[Category: Beta barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  2 23:24:00 2008''

Latest revision as of 10:41, 14 February 2024

Crystal Structure Analysis of Catalase CatF of Pseudomonas syringaeCrystal Structure Analysis of Catalase CatF of Pseudomonas syringae

Structural highlights

1m7s is a 4 chain structure with sequence from Pseudomonas syringae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CATB_PSESY Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1m7s, resolution 1.80Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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