1m34: Difference between revisions

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[[Image:1m34.png|left|200px]]


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==Nitrogenase Complex From Azotobacter Vinelandii Stabilized By ADP-Tetrafluoroaluminate==
The line below this paragraph, containing "STRUCTURE_1m34", creates the "Structure Box" on the page.
<StructureSection load='1m34' size='340' side='right'caption='[[1m34]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1m34]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M34 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M34 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CFM:FE-MO-S+CLUSTER'>CFM</scene>, <scene name='pdbligand=CLF:FE(8)-S(7)+CLUSTER'>CLF</scene>, <scene name='pdbligand=HCA:3-HYDROXY-3-CARBOXY-ADIPIC+ACID'>HCA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
{{STRUCTURE_1m34| PDB=1m34 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m34 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m34 OCA], [https://pdbe.org/1m34 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m34 RCSB], [https://www.ebi.ac.uk/pdbsum/1m34 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m34 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NIFD_AZOVI NIFD_AZOVI] This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m3/1m34_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m34 ConSurf].
<div style="clear:both"></div>


===Nitrogenase Complex From Azotobacter Vinelandii Stabilized By ADP-Tetrafluoroaluminate===
==See Also==
 
*[[Nitrogenase 3D structures|Nitrogenase 3D structures]]
 
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</StructureSection>
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(as it appears on PubMed at http://www.pubmed.gov), where 12501184 is the PubMed ID number.
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{{ABSTRACT_PUBMED_12501184}}
 
==About this Structure==
1M34 is a 16 chains structure of sequences from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M34 OCA].
 
==Reference==
<ref group="xtra">PMID:12501184</ref><references group="xtra"/>
[[Category: Azotobacter vinelandii]]
[[Category: Azotobacter vinelandii]]
[[Category: Nitrogenase]]
[[Category: Large Structures]]
[[Category: Chiu, H J.]]
[[Category: Chiu H-J]]
[[Category: Einsle, O.]]
[[Category: Einsle O]]
[[Category: Howard, J B.]]
[[Category: Howard JB]]
[[Category: Howard, J B.Rees, D C.]]
[[Category: Rees DC]]
[[Category: Schmid, B.]]
[[Category: Schmid B]]
[[Category: Willing, A.]]
[[Category: Willing A]]
[[Category: Yoshida, M.]]
[[Category: Yoshida M]]
[[Category: Atp hydrolysis]]
[[Category: Complex of nitrogenase protein]]
[[Category: Electron transfer]]
[[Category: Nitrogen fixation]]
[[Category: Nitrogenase]]
[[Category: Oxidoreductase]]
[[Category: Signal transduction]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr  2 16:17:09 2009''

Latest revision as of 10:39, 14 February 2024

Nitrogenase Complex From Azotobacter Vinelandii Stabilized By ADP-TetrafluoroaluminateNitrogenase Complex From Azotobacter Vinelandii Stabilized By ADP-Tetrafluoroaluminate

Structural highlights

1m34 is a 16 chain structure with sequence from Azotobacter vinelandii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Ligands:, , , , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NIFD_AZOVI This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1m34, resolution 2.30Å

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