1lqw: Difference between revisions

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-[[Image:1lqw.png|left|200px]]
-{{STRUCTURE_1lqw|  PDB=1lqw  |  SCENE=  }}
+==Crystal Structure of S.aureus Peptide Deformylase==
+<StructureSection load='1lqw' size='340' side='right'caption='[[1lqw]], [[Resolution|resolution]] 1.87&Aring;' scene=''>
-===Crystal Structure of S.aureus Peptide Deformylase===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1lqw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LQW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LQW FirstGlance]. <br>
-{{ABSTRACT_PUBMED_12126617}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.87&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lqw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqw OCA], [https://pdbe.org/1lqw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lqw RCSB], [https://www.ebi.ac.uk/pdbsum/1lqw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lqw ProSAT]</span></td></tr>
-[[1lqw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LQW OCA].
+</table>
+== Function ==
-==Reference==
+[https://www.uniprot.org/uniprot/DEF_STAAU DEF_STAAU] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity).[HAMAP-Rule:MF_00163]
-<ref group="xtra">PMID:012126617</ref><references group="xtra"/>
+== Evolutionary Conservation ==
-[[Category: Peptide deformylase]]
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lq/1lqw_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lqw ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Staphylococcus aureus]]
-[[Category: Mikol, V.]]
+[[Category: Mikol V]]
-[[Category: Hydrolase]]
-[[Category: Pdf]]
-[[Category: Peptide deformylase]]