1kgq: Difference between revisions

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[[Image:1kgq.png|left|200px]]


{{STRUCTURE_1kgq|  PDB=1kgq  |  SCENE=  }}
==Crystal Structure of Tetrahydrodipicolinate N-Succinyltransferase in Complex with L-2-aminopimelate and Succinamide-CoA==
 
<StructureSection load='1kgq' size='340' side='right'caption='[[1kgq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
===Crystal Structure of Tetrahydrodipicolinate N-Succinyltransferase in Complex with L-2-aminopimelate and Succinamide-CoA===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1kgq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_variant_bovis Mycobacterium tuberculosis variant bovis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KGQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KGQ FirstGlance]. <br>
{{ABSTRACT_PUBMED_11910040}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NPI:(2S)-2-AMINOHEPTANEDIOIC+ACID'>NPI</scene>, <scene name='pdbligand=SCO:SUCCINAMIDE-COA'>SCO</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kgq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kgq OCA], [https://pdbe.org/1kgq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kgq RCSB], [https://www.ebi.ac.uk/pdbsum/1kgq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kgq ProSAT]</span></td></tr>
[[1kgq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_bovis Mycobacterium bovis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KGQ OCA].  
</table>
 
== Function ==
==Reference==
[https://www.uniprot.org/uniprot/DAPD_UNKP DAPD_UNKP]  
<ref group="xtra">PMID:011910040</ref><references group="xtra"/>
== Evolutionary Conservation ==
[[Category: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Mycobacterium bovis]]
Check<jmol>
[[Category: Beaman, T W.]]
  <jmolCheckbox>
[[Category: Blanchard, J S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kg/1kgq_consurf.spt"</scriptWhenChecked>
[[Category: Drueckhammer, D G.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Roderick, S L.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Vogel, K W.]]
  </jmolCheckbox>
[[Category: Left-handed parallel beta helix]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kgq ConSurf].
[[Category: Transferase]]
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Mycobacterium tuberculosis variant bovis]]
[[Category: Beaman TW]]
[[Category: Blanchard JS]]
[[Category: Drueckhammer DG]]
[[Category: Roderick SL]]
[[Category: Vogel KW]]

Latest revision as of 10:24, 14 February 2024

Crystal Structure of Tetrahydrodipicolinate N-Succinyltransferase in Complex with L-2-aminopimelate and Succinamide-CoACrystal Structure of Tetrahydrodipicolinate N-Succinyltransferase in Complex with L-2-aminopimelate and Succinamide-CoA

Structural highlights

1kgq is a 1 chain structure with sequence from Mycobacterium tuberculosis variant bovis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

DAPD_UNKP

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1kgq, resolution 2.00Å

Drag the structure with the mouse to rotate

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OCA